Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01934 TCCACAACCTAGTTCACATAAGCTAAGTCACAACCAAATAGCTCATTTGGTGAATTTCTGTTTGTGTGAGAGTGCTTAATTTCTTAGTGTCTCAAAAGCTTAGTTAATTACAAGATGGAGGATCAAAATGCATCTAGTGGATTAGGCAAGATGTTCGTCAAGGTTAAACCTTACCTTGCTATGGTGTCCCTTCAGTTTGGTTATGCAGGAATGTACATCATCACCATGGTTTCTTTCAAGCATGGCATGAGCCATTGGGTGCTCTCTGTGTATCGTCATGTAGTTGCCACCCTCATCATGGCTCCTTTTGCATTTGTCCTTGAAAGAAAAATACGACCAAAGATGACTCTCCCTGTGTTCCTGAGGCTAGCAGTTCTTGGTTTTCTTGAGCCAGTGCTTGATCAAAACTTGTACAACATGGGGATGAAAAACACCTCAACAACATTTGCATCAGCCACCGTTAATGTTATGCCAGCCATTACTTTTATAATGGCACTTATTTTCAGGTTAGAGACAGTGAATTTGAGAAAAGTACACAGTGTGGCTAAGGTAATTGGAACTGCAGTAACAGTTTCAGGAGCAATGGTTATGACTTTGTACAAAGGCCCGGCCCTTCAGTTCATAAAGGGGCAAGCAGCATCCCACCATGAAAGTGGCAGCAGCACACAACCCTCTGAACAACACTGGGTGCTTGGCACTGTTCTGCTCCTTGCAAGTTGTGGTGGTTGGGCTAGCTTCTTTATCTTGCAATCTTTCACTTTGAAGATGTACCCGGCAGAGCTTTCAGTCACAGCTTGGATTTGCTTTTTGGGCATTTTTGAGGGTGGAATTGCCACCCTTATATTTGAACGTGACATGAGTGTGTGGTCCATCGGCATGGACTCAAGGCTCCTTGCTTGTGTTTATTCTGGTGTGGTATGTTCTGGAATGGCATACTATGTACAAGGAGTTGTGACCAGGGAACGTGGACCTGTGTTTGTGACTTCATTCAGCCCTCTGTGCATGATTATTACTGCTGCATTGGGATCCATTGTCTTGGCTGAGCAAGTTTTTACGGGAAGTGTGATTGGAGCTATTATCATTGTGAGTGGACTTTACACTGTGGTATGGGGAAAAAGCAAAGACAATCTGAACAAAACGGATGCAGAAAAAAGTGAGGGCCAAGAGTTGCCAATTAGAGATGGTACAAAATCAGGATCAGACAATTTTGACAGTATTGAGATCAATGTTTCAACTGGGGCAGGGAAGAATGTGCTTCCATCAGCAAGAACATAGGTCCCTTAATTAGGACTCTACCATAACAGATTTTCCTACTAATTAAAAATGATGATATCAAGAGAGATTTTGTGCTATGTACAAATCTTTCCCATTGCCTACCATAGTGGGTAGTGGCTGCGTTTTGTTATGTACCCATTTTGTTTTGTTTTGACCTTTCTTATGTTTTTTAAATTTGAGTATGAGTAAAATAACGTATTAATGCTTTTGTCTGTGCTTTTTGTGGTTTGG 1506 0.4177 MEDQNASSGLGKMFVKVKPYLAMVSLQFGYAGMYIITMVSFKHGMSHWVLSVYRHVVATLIMAPFAFVLERKIRPKMTLPVFLRLAVLGFLEPVLDQNLYNMGMKNTSTTFASATVNVMPAITFIMALIFRLETVNLRKVHSVAKVIGTAVTVSGAMVMTLYKGPALQFIKGQAASHHESGSSTQPSEQHWVLGTVLLLASCGGWASFFILQSFTLKMYPAELSVTAWICFLGIFEGGIATLIFERDMSVWSIGMDSRLLACVYSGVVCSGMAYYVQGVVTRERGPVFVTSFSPLCMIITAALGSIVLAEQVFTGSVIGAIIIVSGLYTVVWGKSKDNLNKTDAEKSEGQELPIRDGTKSGSDNFDSIEINVSTGAGKNVLPSART 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01934 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 243 335 - -
Pste8g01934 386 MobiDBLite consensus disorder prediction 342 369 - -
Pste8g01934 386 Pfam EamA-like transporter family 31 151 IPR000620 GO:0016020
Pste8g01934 386 Pfam EamA-like transporter family 194 331 IPR000620 GO:0016020
Pste8g01934 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 162 - -
Pste8g01934 386 PANTHER WAT1-RELATED PROTEIN 19 343 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01934 Pste-Chr8 14720150 14725500 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01934 16 363 Nodulin-like Gene Family AT1G44800 64.773 1.26e-168 474