Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01930 AAAAATCCAACTGTCTTGGGATGGAATGAAAGGCTTCAACTTGCCTTAGATGCAGCAAATGTTAGTTACAACATTAACAAGTGTACTACTAATATAAAAAATATAGGGTTGGATTATCTGCATAATGGATGCAAGCCACCAATAATTCATGGAGATTTAAAAGGTTCCAACATCTTACTAGATGAAAATATGCATGCCAAGATTTCAGACTTTGGACTCCCGAGAACTTTTGCAAATGACAATGACATACACTCATCTGGCACACCAGGTTACCTTGATCCTGAATATTATTCCTCAGGGACTCTTAATAAAAGAAGTGATGTATATAGTTTTGGGGTAATTTTGTTAGAGTTAATCAGTGGTAAACCAGCAATAATAGGAACTCCTGACAGACCTAGTCACATACACTCGGTTAAAGTCAAACTTGAAAGTGGAAATATTCAAGCAATAGTTGATCCAAGGTTACAAGAAAATTATCATAAATATCTCTTCAAAGGACTACAAGCAACACTAGAGAATCATTCTTCATGGAATCTACGCAAATTGATTTTTGTGACTCAGATATATGTCCAATTTTTGGTGGACAAGAAACACATGGGAGAATTGCTATGGATTCTGGTTTTTGCAGTTTGTGCTTCATCACTCATTAATATTCTTGCGGAGAACATTGAAAGGGCTGACAAGAACTTTGCCAATATTGATTATTCAGGTGTTATAAGCATTGACTGTGGGGTATACGAAGCTTACATTGATAAGACCACCAACTTGCAATATCAAGGAGATTATATGCAATTTGGTGAAATTCATAATATATCCTCAATTCACAACTTTGTCCATGTAAGTCAAATTCAAAAGCAGTTGAACACATTGAGAATTTTCCCTAATGGGAAGAGAAATTGCTACATCTTGAGACCCAAGCAGGGTAGGAACAAAAAGTATATTATCAGGGCTTACTTTGCATATGGAAACTATGACAACAAAGCTAAACCACCGATATTTGATTTGCATGTTGGAGTCAATTTCTTCAAGACAATAAACTTGACTGGGAATAAGACCCTTATTCGAATTGAAGCTATTCATTTTGCCTCAACAGACACAATAGATGTTTGTCTTGTGAACACTGACCATGGGGTGCCTTTGATTTCACTATTGGAACTGTGGCCTTTGGACAATTCTATTTATCAAAGTTCATCCACTTTATTAACGCTAGATCTCCTCACACGAATTAACCTTGGTGCATCTGAAGATAACAATTCCTTCATCAGGTACACAGATGATATATACGGAAGGTCTTGGGAAGTACAAAACAGTTATAACAAGAATCAAATGAAAACATCATTAGCTATTGATTTGGATAAACTGGTTGATCCTTACAAACTGCCTGCAGAAGTTTTGAGCACTGCAGTGAAGGTTTTCAAGTCCAAACCATTGGTATTCACACAGAACTATGGGACTGATTCTGAATATTATGTGTATCTTCATTTTTTTGACTTTGAGAATATGAAAAATGAACAAAAAAGAATATTGAATATTGTTATTAATTGTTTTGATGATGATGAAATCACACTACCCCTCACTCTTTCATACTGGAAGCCCAATAGCATAATTGTACCTGTAAAACAAGGGAAGGGCATTACTAAGATATTGATTGAAGCCACCTCTGATTCTGACTTACCTGCAATGCTTAATGCTCTTGAGATTTACAGAGTAGTAAATCAGTCAGACTCTGCTACTCAACAAGAGGATGTTGATGCTATCTTCCACATCAAAGATTTTTATAATATCTCTAGAATTAATTGGCAAGGAGACCCTTGTGAACCAGAGAATTTTACATGGGAAGGTGTGTCTTGCAGCAGTGGGAACACTCCAAGGATCATTTCATTAAACCTGAGCTCAAGCCAGTTGTCAGGTGAAATAGATGTCTTATTCTCTAACCTCACATATTTGGAGAGTTTGGATTTGTCAAACAATGAATTGATAGGGGAGGTCCCAGAATGCTTTTCAAAACTACCACAATTAAAGATCCTTAATTTGTCCAGGAATATGCTCACAGGTTCCATTCCTGAGAGTCTAAAGGCAAACTCATCAAACAACTCTTTGCAACTGAGTTTGGATGGAAATCCCCGTCTCTGTCAGGCAGGTTCATGCAAGATCAACAACCACCAGAAGTTTATTATTCCATTAGTTGCATCTATAACGACATTTGTCACAGTGATTCTCATTATATTTACCATAGTCATGGTGATTTGGAGACTTAGAAAAAATGGAAAAGTGATTTCTTCAATACCAATCAAAGATGAGCTACTGAAATCAACAAATCAAGTATTTTCTTACCCAGAGATTATTAGAATCACTAATAATTTCTCAACAATGATGGGAAAAGGAGGATTTGGTAAGGTTTACCGAGGTACTTTAGAGAGTGGCAAAGTAGTTGCCGTGAAGATACTTTCTTTGCCATCAGCACAAGGGTATAAGGAATTTCAAAACGTGGTTTCTCTTGTGGGTTATTGTGACGAAGTTGACATTAAAGCCCTTATTTATGAATATCTCCCAGAAGGGAGCCTCCAACAGAATTTGTCAGATAAAAACCCAAATATGTTAGAATGGATCCAAAGACTTAAAATTGCAATGGATACAGCAAATGGATTGGACTATTTGCATAATGGATGTAAGCCCCCTGTGATTCACAGAGATTTAAAATCATCCAATATCTTACTAGATGAAAATATGCATCCCAAGATTTCAGATTTTGGAGTGTCTAAAACTTTTGCCAACGACACAGATACTCATGTCACAACTTGTCCAGCAGGCACACCAGGTTACGTAGATCCTGAATTTTACTGCTCAGGGACTCTGAATAAAAAGAGTGATGTTTATAGTTTTGGGATAATTCTACTAGAGCTAATTACGGGTCAACCAGCACTAAGAGGAACTCCTGACAATCTCAGTTACATACTTCCTTGGGTTAGTAATAAACTGAGACTTGGAGATATCCAAGAAATAGTTGATCCAAGGTTACAAGGGAAATACAATGCTGCTTCAGCATGGAAGTTTACTGGAATAGCCATGTCTTGCCTTTCTCAAGTTCGAATTCATAGACCTGACATAGGCCACTTAGCCTCAGAATTAAAGGAATGTTTGTCTCTTGAATTATCACTTGAAAGGACTGTGAGCAACGTGAGAGATTCATTGGTCATGAGTTCTAGGCAGATTGAGTTCCATTAGTGTACAAAGGTTACATGCGGTTGGCTGATTTCATTCAGAGTTAGCCCCACATGATTAATTGATTTGGCTTTGTAAACTTGTATGTGTATTAGCTTTATATTAATAATTGATCTTGTCGTCTAAGTTAAGGATACGTTCAACAGTCAATCCATATTCAAGTAGTTTGTTTTACAC 3399 0.3666 KNPTVLGWNERLQLALDAANVSYNINKCTTNIKNIGLDYLHNGCKPPIIHGDLKGSNILLDENMHAKISDFGLPRTFANDNDIHSSGTPGYLDPEYYSSGTLNKRSDVYSFGVILLELISGKPAIIGTPDRPSHIHSVKVKLESGNIQAIVDPRLQENYHKYLFKGLQATLENHSSWNLRKLIFVTQIYVQFLVDKKHMGELLWILVFAVCASSLINILAENIERADKNFANIDYSGVISIDCGVYEAYIDKTTNLQYQGDYMQFGEIHNISSIHNFVHVSQIQKQLNTLRIFPNGKRNCYILRPKQGRNKKYIIRAYFAYGNYDNKAKPPIFDLHVGVNFFKTINLTGNKTLIRIEAIHFASTDTIDVCLVNTDHGVPLISLLELWPLDNSIYQSSSTLLTLDLLTRINLGASEDNNSFIRYTDDIYGRSWEVQNSYNKNQMKTSLAIDLDKLVDPYKLPAEVLSTAVKVFKSKPLVFTQNYGTDSEYYVYLHFFDFENMKNEQKRILNIVINCFDDDEITLPLTLSYWKPNSIIVPVKQGKGITKILIEATSDSDLPAMLNALEIYRVVNQSDSATQQEDVDAIFHIKDFYNISRINWQGDPCEPENFTWEGVSCSSGNTPRIISLNLSSSQLSGEIDVLFSNLTYLESLDLSNNELIGEVPECFSKLPQLKILNLSRNMLTGSIPESLKANSSNNSLQLSLDGNPRLCQAGSCKINNHQKFIIPLVASITTFVTVILIIFTIVMVIWRLRKNGKVISSIPIKDELLKSTNQVFSYPEIIRITNNFSTMMGKGGFGKVYRGTLESGKVVAVKILSLPSAQGYKEFQNVVSLVGYCDEVDIKALIYEYLPEGSLQQNLSDKNPNMLEWIQRLKIAMDTANGLDYLHNGCKPPVIHRDLKSSNILLDENMHPKISDFGVSKTFANDTDTHVTTCPAGTPGYVDPEFYCSGTLNKKSDVYSFGIILLELITGQPALRGTPDNLSYILPWVSNKLRLGDIQEIVDPRLQGKYNAASAWKFTGIAMSCLSQVRIHRPDIGHLASELKECLSLELSLERTVSNVRDSLVMSSRQIEFH 1074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01930 1074 SUPERFAMILY L domain-like 607 702 - -
Pste8g01930 1074 Pfam Malectin-like domain 241 570 IPR024788 -
Pste8g01930 1074 SMART serkin_6 786 1047 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01930 1074 FunFam Leucine-rich repeat receptor-like kinase 581 713 - -
Pste8g01930 1074 Gene3D Transferase(Phosphotransferase) domain 1 850 1063 - -
Pste8g01930 1074 Gene3D Transferase(Phosphotransferase) domain 1 1 191 - -
Pste8g01930 1074 ProSitePatterns Serine/Threonine protein kinases active-site signature. 894 906 IPR008271 GO:0004672|GO:0006468
Pste8g01930 1074 ProSiteProfiles Protein kinase domain profile. 786 1047 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01930 1074 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 850 1056 - -
Pste8g01930 1074 ProSiteProfiles Protein kinase domain profile. 1 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01930 1074 SUPERFAMILY Protein kinase-like (PK-like) 36 156 IPR011009 -
Pste8g01930 1074 Gene3D Ribonuclease Inhibitor 587 710 IPR032675 -
Pste8g01930 1074 Pfam Leucine rich repeat 627 683 IPR001611 GO:0005515
Pste8g01930 1074 Gene3D Phosphorylase Kinase; domain 1 763 849 - -
Pste8g01930 1074 Pfam Protein kinase domain 36 137 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01930 1074 Pfam Protein kinase domain 790 982 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01930 1074 SUPERFAMILY Protein kinase-like (PK-like) 770 1041 IPR011009 -
Pste8g01930 1074 PANTHER OS07G0107800 PROTEIN-RELATED 239 1047 - -
Pste8g01930 1074 ProSitePatterns Serine/Threonine protein kinases active-site signature. 48 60 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01930 Pste-Chr8 14604454 14618426 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01930 1 163 Receptor kinase-like Gene Family AT2G19230 47.337 7.13e-38 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pste8g01930 Malectin_like 1.2e-78 CL0202