Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01924 ATGATGGCAGAGAACGGTGATCAAGCCCAAACCACAAGCTGGTATCAGCTATGCTTTCTTAACGCTGGTTCAGATAACAGTTCAGAATCAGATGATTCAGACGTAGAATCTGTAGTCATAACTCCTGCCACTCCAATTTCAACTAGTATTCAACAAGAATTTTTGTCACTACCACTTTCATTGTCACCACCATTGCCACTAGCACCTAATCTACAATATGAAATTGATTGGACACCACTACCAATGCCGCAGCCTCAGTCAGATTTTCTACCACATTCGGCTAATTCAACTCCAATTAGTACATGGATTGAACCTTTACCACTGCCATCACTACCAAACCCAGAATTTGAAATTGATTTGAGTTTACCACTACCACGTCCACTCCCATTATCACTGCCACCACTACCACCGGTCCCAGATCTCACACCGCCTCCACCTCCACCTCTTGAGAGAGCTTCTGCTAGAATCTTTAACATTGAAGTACAGCAAGATAGTGATGTATTTGAAGGCGATCAAAGTGACAGAACAATGGAAACCAAGAATGGCATTAGCATGGTGACAGTCTCAGACATACAGAAATTCTCCAACTGCCCCATCTGCATGGATGAGTTTGAAGTTGGTGATCAAGCATGCCAGCTACCCTGCACCCACTTCTACTGTCGTGGCTGCATTTTTCGTTGGCTTAACAGCAGCCTAACATGTCCTATTTGCAGGCATCAGTTGAAAATGTGTGATTTTGATGTAAAAAAGGATAACAATGGTTTGCACTCACAATCTGAAATTCCACTGCCACAATCACTTATAAATGATAATATTGGTTTGGACTCTCCATTTGAAGTTCTGCCACCGCAGTCATCAGAATCAAGGTATATTTCGCTGGCACGCTGGTTGGCTTCTATGCAATCCTCTCCCTCTATTAGACCAGATACAGAGAATAGTGCTGGTGGTAACTCAGATGAAGCTGATTATGATAGTGCATGTGATGATGAGCTTGATGATATTCATGAAGGTGGTGCCTCTCAAAATGATCCTCATCCACCTATTTAA 1047 0.4269 MMAENGDQAQTTSWYQLCFLNAGSDNSSESDDSDVESVVITPATPISTSIQQEFLSLPLSLSPPLPLAPNLQYEIDWTPLPMPQPQSDFLPHSANSTPISTWIEPLPLPSLPNPEFEIDLSLPLPRPLPLSLPPLPPVPDLTPPPPPPLERASARIFNIEVQQDSDVFEGDQSDRTMETKNGISMVTVSDIQKFSNCPICMDEFEVGDQACQLPCTHFYCRGCIFRWLNSSLTCPICRHQLKMCDFDVKKDNNGLHSQSEIPLPQSLINDNIGLDSPFEVLPPQSSESRYISLARWLASMQSSPSIRPDTENSAGGNSDEADYDSACDDELDDIHEGGASQNDPHPPI 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01924 348 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 183 251 IPR013083 -
Pste8g01924 348 SMART ring_2 197 237 IPR001841 -
Pste8g01924 348 MobiDBLite consensus disorder prediction 302 319 - -
Pste8g01924 348 Pfam Ring finger domain 196 238 IPR001841 -
Pste8g01924 348 ProSitePatterns Zinc finger RING-type signature. 215 224 IPR017907 -
Pste8g01924 348 MobiDBLite consensus disorder prediction 302 348 - -
Pste8g01924 348 PANTHER TARGET OF ERK KINASE MPK-1 185 242 - -
Pste8g01924 348 ProSiteProfiles Zinc finger RING-type profile. 197 238 IPR001841 -
Pste8g01924 348 SUPERFAMILY RING/U-box 196 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01924 Pste-Chr8 14532790 14533836 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01924 185 243 C3H Transcription Factor Family AT1G68180 44.068 1.46e-11 62.0