Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01909 GTCACTCTTGATCTTTGATCAGTAGCAAGCAGTAGCAGTGGAATGCAACAGCAACGGCCAACACGAACATGAATGATGAAATTCCCATTTGGGGTTAATAGAAATGCGAGGTTTCGATGGACGAGAACCCTAACCCATCAGTCCGTCCTCCCACTCCATCTTCCTCACTAGAATTCCTCAAACAAGTCCAAGCCGATCTCAAGCGCCATCGCCCTCTCGCTTCAACGCAATTGCAGGGCGTCAGGCCCAAGCGATCCATGGTGGCTCAACCAAAGATCCCGACCAAGTCCCAAGACTCCGTTTCCGACACCTGCACCGCTGAAGGCTGCAAAAACGAACCCTCTTTGCAAGAGGAATCGCAAACCATAGGCGCTGCACGCAAGAAGCTTCTTTTTTCAACTCAGACCAACACTGCCACTGCACACCCTCTAAATGAAGCATCCATTGAATTCAATCAACATGTGAAGCACCAAAATGTGCAGCAAGCAGAGCCTGAAACTAGTTTGATATGTCAGGGAGGTAAGAGTTGTCTGCTGCCAAAGAGAACAATAGTTACTCAAGATCATCTGCAGCAATTCAAAAACTTTTTGAGCCAACCAGCTACACAATCTTCTGTATTGGGATTGCCATGCCCTACAACTACATCAGTCCATTCAAGTTCAGCTCCCATGCTGAATTCCATAACTCATTGTCCAAATTCCTTCATAGATAGTGGCTCACATGTGGCTGCAGATCCTTGTGGGAACTTGAATGTTAAACCTCATCTTATAACTCAAGCGAATGTTAAATCACCAAATAATTCCCTGAAAGACACCAATAAAATGTCAATTGATCATGTGGCAAGAGCAGTTCAAGATTGCAATTCACTAATTGATGCAGAGTTGACATTTAACCAGAGTGATCCATCTAAGGAGCAGCAAGGGTGTATGCTAAAGGAAACTAGTATTTCGAAGTATACTTACTGTCGTGATGGCATGTCAAGTAAATCAGAAGCCTCTGCAGCTGTTACCAACATACAGCCTCAGGCACCAACTTCATCTTCAGATGTGAAGTTGGAATCTTCTAAGTTAGAAAAGCAAGAGAAAAATGCAAGTTGCAAAGGATCATCAGGCACTCGAAAGAGGACCTATGACCCTGAATTGTTTTTTAAAGTCAATGGAAAGCTTTATCAAAGGCTTGGCAAGATAGGTAGTGGTGGAAGCAGTGAGGTACACAAAGTAATTTCATCAGACTGTACAATCTATGCACTTAAAAAGATAAAATTAAAGGGTCGTGATTATGCCACTGCATATAGCTTTTGTCAAGAGATTGAGTATCTACATAGGCTGAAAGGAAAGAATAATATTATCCACCTTATAGATTATGAGGTGACTGACAAGGCTTTGTTTGAGGGAGTCATAAATGGCTCCTTCAGTAATAAGAATGGTAGAGTCAGGGATGATGGATACATATACATGGTACTTGAATACGGGGAAATTGATTTGGCTCATATGTTGTCTCAAAAGTTGAAGGAACTGGACGGAAGCAACAAGACCATAGATGATAACTGGCTTCGATTTTATTGGCAGCAAATTCTTCAAGCTGTCAACACAATTCATGAAGAACGTATTGTGCATTCTGACTTGAAGCCAGCTAACTTCCTCCTTGTCAAAGGTTCCTTAAAGCTGATTGATTTTGGAATAGCCAAAGCAATAATGAGCGATACAACAAACATCCAACGTGATTCACAGGTTGGTACTCTAAGTTACATGTCACCAGAAGCATTTATGTGCAACGAGAGTGATGCGACTGGAAACATAATAAAATGTGGTAGGCCATCAGATATCTGGTCCCTTGGCTGCATTCTTTACCAAATGGTATATGGGAGAACACCCTTTGCTGATTACAAGACATTTTGGACCAAATTTAAAGTTATAACTGATCCAAATCATGAAATTACATACGAACCAGTTTCAAATCCTTGGCTACTGGATCTTATGAAAAGGTGTCTCGCATGGGATCGCAACGAAAGGTGGAGAATTCCACAGCTGCTCCAGCATCCTTTTCTAGTTCCCCCAGTTCCAATTGATCCATCTGTGTCCCAAGACCAAACCTTTAAATTGCTGCAACTTATATCTGAAACTTGCATAAATGACCCAGAAGCATCGCAGCTCTGTGGTCATCGCCAACAGGTGCTCGGCGATCCAATAAACTTAACAAGTATTTATTCATTAAATTCCCTAGACCAACAGTGTAAATTTCTGTCCCGAATATCAGAACTCTGTATTCAGCTACAGCAACGATTGACAAATACTAATAAACAATAGGCGCTTGTTTTGTTTAAGCTTATATTGGGAATTTATAAACTAATGTGAAAAGCCGTCTTCACA 2369 0.4158 MDENPNPSVRPPTPSSSLEFLKQVQADLKRHRPLASTQLQGVRPKRSMVAQPKIPTKSQDSVSDTCTAEGCKNEPSLQEESQTIGAARKKLLFSTQTNTATAHPLNEASIEFNQHVKHQNVQQAEPETSLICQGGKSCLLPKRTIVTQDHLQQFKNFLSQPATQSSVLGLPCPTTTSVHSSSAPMLNSITHCPNSFIDSGSHVAADPCGNLNVKPHLITQANVKSPNNSLKDTNKMSIDHVARAVQDCNSLIDAELTFNQSDPSKEQQGCMLKETSISKYTYCRDGMSSKSEASAAVTNIQPQAPTSSSDVKLESSKLEKQEKNASCKGSSGTRKRTYDPELFFKVNGKLYQRLGKIGSGGSSEVHKVISSDCTIYALKKIKLKGRDYATAYSFCQEIEYLHRLKGKNNIIHLIDYEVTDKALFEGVINGSFSNKNGRVRDDGYIYMVLEYGEIDLAHMLSQKLKELDGSNKTIDDNWLRFYWQQILQAVNTIHEERIVHSDLKPANFLLVKGSLKLIDFGIAKAIMSDTTNIQRDSQVGTLSYMSPEAFMCNESDATGNIIKCGRPSDIWSLGCILYQMVYGRTPFADYKTFWTKFKVITDPNHEITYEPVSNPWLLDLMKRCLAWDRNERWRIPQLLQHPFLVPPVPIDPSVSQDQTFKLLQLISETCINDPEASQLCGHRQQVLGDPINLTSIYSLNSLDQQCKFLSRISELCIQLQQRLTNTNKQ 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01909 729 MobiDBLite consensus disorder prediction 293 334 - -
Pste8g01909 729 FunFam serine/threonine-protein kinase mph1 isoform X1 465 647 - -
Pste8g01909 729 CDD PKc_Mps1 349 644 IPR027084 -
Pste8g01909 729 SUPERFAMILY Protein kinase-like (PK-like) 345 652 IPR011009 -
Pste8g01909 729 ProSitePatterns Protein kinases ATP-binding region signature. 357 379 IPR017441 GO:0005524
Pste8g01909 729 MobiDBLite consensus disorder prediction 293 312 - -
Pste8g01909 729 Gene3D Transferase(Phosphotransferase) domain 1 463 646 - -
Pste8g01909 729 ProSitePatterns Serine/Threonine protein kinases active-site signature. 498 510 IPR008271 GO:0004672|GO:0006468
Pste8g01909 729 FunFam Dual specificity protein kinase TTK 344 453 - -
Pste8g01909 729 Pfam Protein kinase domain 351 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01909 729 Gene3D Phosphorylase Kinase; domain 1 344 429 - -
Pste8g01909 729 MobiDBLite consensus disorder prediction 38 65 - -
Pste8g01909 729 ProSiteProfiles Protein kinase domain profile. 351 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01909 729 PANTHER MIXED LINEAGE PROTEIN KINASE 53 676 - -
Pste8g01909 729 SMART serkin_6 351 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01909 Pste-Chr8 14312625 14318041 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01909 357 645 MAP Kinase Kinase Kinase AT4G08470 29.693 2.96e-23 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Pste8g01909 Pkinase 8.4e-56 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01909 8 14312625 14318041 Pste8g01909 8 14312625 14318041 ECH