Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01905 TTTCTTTTATATTTATATATTTCTCTATATAAAGAGCCGAAACCAGTGGCATTGAAGTTAGAAGAAAAATTGAGTGTGGTAAACTTTGTGACAATGGCGGTTTCAGTTGAGAAGGTTCCGTTGGAGAGAATCTTAAGCAATCCGACAAGGGTTCCGGACCCGTATTCTTCAAGCAGCGACGACGAGGAAGAGGAGCACGATTTGTACATCAAAGATCTGATTAAGGATGTGCATAAAGATTTGGAGGAATCAGTGTTTGACCCGCGAGACGAGAATACGGTTGATAATTGGGTGAAACGGAACCCTTCGATGGTCCGTCTGGCAGGGAAGCATCCCTTTAATGCGGAGGCTCCAATGGACCGCATCATGCACTACGGTTTCGTGACCCCGGCCGAGCTCCATTACGTGCGGAACCACGGTCGGGTCGCGAAGGGGGAGTGGGAGAACTGGACCGTTGAAGTTTCCGGTTTGGTGAAACGGCCCACGAGTTTCACCATGAACCAGCTGGTGAACGATTTTCCTCACCGCGAGTTCCCCGTGCTGATCGTGTGCAGTGGGACCCGCCGCAAGGAGCTGAACTTGGTGAAGAGGACTTCCGGCTCCAACATGACCACTGGGACCGCTTCCAACTCTGTCTGGCGCGGCGTGACCCTGCGCCACTTGCTGAAGAAGTGCGGCATTCTCTCACGTGCGAAGGGCGCGACCCACGTGTGTTTCGAGGGGGCCGAGGATCTCCCCGGAGGTGGTGGTTCCAAGTACGGAACTAGCATCACTCGAGAGGAGGCCACGGACCCTTCACGTGATATCATGCTTGCTTTCTTGCAAAACGGCGAGCCTCTCCTCCCTGACCATGGCTACCCCGTTCGCCTCATTCTTCCCGGCTTCATTGGAGGCCGTATGGTGAAGTGGCTCAAACGCATTGTCGTTGCCAACCACGAGTCCCAGAATTATTATCATTACAGGGACAATAAAATTCTCCCCTCTCACGTTGATTCTGAACTCGCCAATGAACAAGGTTGGTGGGATTTACAAGAGTATTGCCTCTACGAGTTGAATATAAACTCAGTAATAATTAAGCCGTCCCACAATGAGATCTTGGCCATCAACCCAAACACTTTGTCGAAGCCTTATTTACTGAGAGGCTACTCATACTCTGGTGGTGGCAGAAGAGTGATACTTGTTGAGGTAACATTGGACGGTGGAGCAACATGGCGGCTGACAACATTGGAGCGTCGCGAGAGACCCAACAAATATGGCAAGTATTGGAGCTGGTGCTTCTGGTCTTTGGAGGTCGAGGTGAGGGAACTGCTTGTGGCCAGGGACATTGCTGTGCGTGCTTGGGATGAAGGCCACAACACCCAGCCTGAACACCTTAATTGGAATCTTATGGGCATGCTGAACAACAGCTGGTACAGAGTGAAAACAAGTATGGGGAAGCCAGTAAAGGGTGAGATTGGAATAGTGTTTGCACACCCGTGCTTACCAGGAAACCTACCCGGTGGGTGGATGGAAAAGGAAAAACATATAGAAATATCAGTGGACAAAAAACCAAGCATGAAAAAGAGTGGGTCCTCGCCGGACCTGACAGCAACCGTCAATAAGATCCCCATCACCGAAGTCAGAAAGCACAACCACCGCGACTCCGCTTGGATCATCATCCACGGACACGTCTACGACGCCACCAAATTCCTCTACGACCACCCCGGAGGCCCCGACAGCATTCTCGTCAACGCCGGCACCGACTGCACCGAAGATTTTGACGCCATCCACTCCGAAAGGGCAAGGAAGTTGCTTGAAAATTTCCGAATCGGCGAGATCATCACCACAGGGTACGAGTCAGAAGATGAGGACTCAGCACCTGCAAAGGAGTCGGTGAAAGAGAAAGCCAAAGCGAAGGAAAGCGATGCAGCAGAAGCAGAAAGCAAGGTGGCGCTCAACCCACGGCAAAAGATACACGTGAAGCTCGTGTCAAAGACGGAGATTTCCCACGATGTGCGACGCTTCCGTTTCGCGTTGCCAAAAGAGAACCAAGTACTGGGATTACCCGTGGGGAAGCACGTTTTCTTGTATGCCCACACCGACGAAAACAACCTCGTCGTTCGGGCCTACACTCCGACAAGTGGGCCCGAAGAGGTGGGGTACTTCGATTTGGTCGTGAAAATTTACTTTAAAGGCGTGCACCCCAAGTTCCCCAACGGAGGAGCCATGTCGCAGTACTTGGAGTCTCTGGAAATTGGGTCCGTGTTGGATGTCAAAGGCCCATTGGGCCACATCGAGTACACTGGAAAAGGCAACTTCATAGCCCACGGAGAGCCCAAATTCGCGAAGCGGCTTGCCATGCTGGCTGGTGGGACCGGGATCACGCCGATTTACCAAGTGATACAAGCGGTTCTGAAGGACCCGGAGGACCGAACCGAAATGTTTTTGGTCTATTCAAACAAAACAGAGAGTGATATATTGCTGAGGGAAGAGTTGGACGCGTGGGCGAAGAAACACAGTGACCGGTTCAAGGTGTGGTACGTTGTGGACAAAGCCGGGAATGACTGGGCATTCAGTACGGGCCGCGTTAATGAGAGTATCATGAGGGTGCACCTTCCTGGACCGTCTGATGCCTTGGCCTTGGCGTGTGGGCCACCCCCCATGATTCAGCTTACGGTGCAGCCTAGTTTGGAGAACATTGGGTACAAAAAGGATGATGTGCTCGTGTTCTAGGCCATCACCAGAGTTAGATCATATCACTCAGTTATATATGCTGTGCTATGCAACTATGTCTATTTCTTCTTCTTGTTTCTCTATCAACTTTCATTCGAACCTCTGTAACGCTAAAATAAAGAGCCATTCACATTTATATAATAATAAAATTACAAAAGTTCCTGTTTTTATCATA 2887 0.5068 MAVSVEKVPLERILSNPTRVPDPYSSSSDDEEEEHDLYIKDLIKDVHKDLEESVFDPRDENTVDNWVKRNPSMVRLAGKHPFNAEAPMDRIMHYGFVTPAELHYVRNHGRVAKGEWENWTVEVSGLVKRPTSFTMNQLVNDFPHREFPVLIVCSGTRRKELNLVKRTSGSNMTTGTASNSVWRGVTLRHLLKKCGILSRAKGATHVCFEGAEDLPGGGGSKYGTSITREEATDPSRDIMLAFLQNGEPLLPDHGYPVRLILPGFIGGRMVKWLKRIVVANHESQNYYHYRDNKILPSHVDSELANEQGWWDLQEYCLYELNINSVIIKPSHNEILAINPNTLSKPYLLRGYSYSGGGRRVILVEVTLDGGATWRLTTLERRERPNKYGKYWSWCFWSLEVEVRELLVARDIAVRAWDEGHNTQPEHLNWNLMGMLNNSWYRVKTSMGKPVKGEIGIVFAHPCLPGNLPGGWMEKEKHIEISVDKKPSMKKSGSSPDLTATVNKIPITEVRKHNHRDSAWIIIHGHVYDATKFLYDHPGGPDSILVNAGTDCTEDFDAIHSERARKLLENFRIGEIITTGYESEDEDSAPAKESVKEKAKAKESDAAEAESKVALNPRQKIHVKLVSKTEISHDVRRFRFALPKENQVLGLPVGKHVFLYAHTDENNLVVRAYTPTSGPEEVGYFDLVVKIYFKGVHPKFPNGGAMSQYLESLEIGSVLDVKGPLGHIEYTGKGNFIAHGEPKFAKRLAMLAGGTGITPIYQVIQAVLKDPEDRTEMFLVYSNKTESDILLREELDAWAKKHSDRFKVWYVVDKAGNDWAFSTGRVNESIMRVHLPGPSDALALACGPPPMIQLTVQPSLENIGYKKDDVLVF 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01905 872 FunFam Nitrate reductase 60 309 - -
Pste8g01905 872 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 501 576 IPR001199 -
Pste8g01905 872 MobiDBLite consensus disorder prediction 1 34 - -
Pste8g01905 872 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 670 677 IPR001709 GO:0016491
Pste8g01905 872 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 841 849 IPR001709 GO:0016491
Pste8g01905 872 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 786 797 IPR001709 GO:0016491
Pste8g01905 872 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 774 783 IPR001709 GO:0016491
Pste8g01905 872 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 535 545 IPR001709 GO:0016491
Pste8g01905 872 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 748 767 IPR001709 GO:0016491
Pste8g01905 872 MobiDBLite consensus disorder prediction 584 608 - -
Pste8g01905 872 Pfam Oxidoreductase FAD-binding domain 622 729 IPR008333 -
Pste8g01905 872 SMART Cyt_b5_2 504 576 IPR001199 -
Pste8g01905 872 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 502 578 IPR036400 -
Pste8g01905 872 PIRSF Nitr_rd_NADH 3 872 IPR012137 GO:0006809|GO:0042128|GO:0050464
Pste8g01905 872 Pfam Mo-co oxidoreductase dimerisation domain 315 444 IPR005066 GO:0016491|GO:0030151
Pste8g01905 872 Gene3D - 499 578 IPR036400 -
Pste8g01905 872 MobiDBLite consensus disorder prediction 581 612 - -
Pste8g01905 872 Pfam Cytochrome b5-like Heme/Steroid binding domain 507 575 IPR001199 -
Pste8g01905 872 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 532 539 IPR018506 GO:0020037
Pste8g01905 872 PRINTS Cytochrome B5 reductase signature 841 849 - -
Pste8g01905 872 PRINTS Cytochrome B5 reductase signature 748 767 - -
Pste8g01905 872 PRINTS Cytochrome B5 reductase signature 648 659 - -
Pste8g01905 872 PRINTS Cytochrome B5 reductase signature 670 677 - -
Pste8g01905 872 PRINTS Cytochrome B5 reductase signature 786 797 - -
Pste8g01905 872 PRINTS Cytochrome B5 reductase signature 715 729 - -
Pste8g01905 872 SUPERFAMILY E set domains 319 443 IPR014756 -
Pste8g01905 872 PRINTS Cytochrome B5 signature 563 575 IPR001199 -
Pste8g01905 872 PRINTS Cytochrome B5 signature 536 550 IPR001199 -
Pste8g01905 872 PRINTS Cytochrome B5 signature 551 558 IPR001199 -
Pste8g01905 872 PRINTS Cytochrome B5 signature 526 536 IPR001199 -
Pste8g01905 872 SUPERFAMILY Riboflavin synthase domain-like 611 731 IPR017938 -
Pste8g01905 872 Gene3D - 57 309 IPR036374 -
Pste8g01905 872 PRINTS Eukaryotic molybdopterin domain signature 233 249 IPR008335 GO:0016491
Pste8g01905 872 PRINTS Eukaryotic molybdopterin domain signature 389 399 IPR008335 GO:0016491
Pste8g01905 872 PRINTS Eukaryotic molybdopterin domain signature 266 279 IPR008335 GO:0016491
Pste8g01905 872 PRINTS Eukaryotic molybdopterin domain signature 414 426 IPR008335 GO:0016491
Pste8g01905 872 PRINTS Eukaryotic molybdopterin domain signature 149 160 IPR008335 GO:0016491
Pste8g01905 872 PRINTS Eukaryotic molybdopterin domain signature 362 374 IPR008335 GO:0016491
Pste8g01905 872 PRINTS Eukaryotic molybdopterin domain signature 250 263 IPR008335 GO:0016491
Pste8g01905 872 PRINTS Eukaryotic molybdopterin domain signature 317 329 IPR008335 GO:0016491
Pste8g01905 872 PRINTS Eukaryotic molybdopterin domain signature 175 190 IPR008335 GO:0016491
Pste8g01905 872 PRINTS Eukaryotic molybdopterin domain signature 348 362 IPR008335 GO:0016491
Pste8g01905 872 PRINTS Eukaryotic molybdopterin domain signature 427 440 IPR008335 GO:0016491
Pste8g01905 872 PRINTS Eukaryotic molybdopterin domain signature 74 88 IPR008335 GO:0016491
Pste8g01905 872 PRINTS Eukaryotic molybdopterin domain signature 160 172 IPR008335 GO:0016491
Pste8g01905 872 PRINTS Eukaryotic molybdopterin domain signature 96 112 IPR008335 GO:0016491
Pste8g01905 872 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 617 730 IPR017927 GO:0016491
Pste8g01905 872 Pfam Oxidoreductase molybdopterin binding domain 108 287 IPR000572 -
Pste8g01905 872 Gene3D - 319 495 - -
Pste8g01905 872 Gene3D Translation factors 609 724 - -
Pste8g01905 872 CDD cyt_b5_reduct_like 622 872 - -
Pste8g01905 872 Pfam Oxidoreductase NAD-binding domain 749 854 IPR001433 GO:0016491
Pste8g01905 872 FunFam Nitrate reductase 319 495 - -
Pste8g01905 872 Gene3D - 725 872 IPR039261 -
Pste8g01905 872 FunFam NADH-cytochrome b5 reductase 608 724 - -
Pste8g01905 872 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 718 870 IPR039261 -
Pste8g01905 872 PANTHER SULFITE REDUCTASE 40 448 - -
Pste8g01905 872 FunFam Nitrate reductase [NADH] 725 872 - -
Pste8g01905 872 FunFam Sulfite oxidase, mitochondrial 500 579 - -
Pste8g01905 872 Coils Coil 591 611 - -
Pste8g01905 872 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 56 315 IPR036374 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01905 Pste-Chr8 14192208 14196658 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01905 605 872 NADPH P450 reductases AT5G17770 36.803 4.16e-52 182