Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01904 CTTTCCCACATAAAGTGAAAGAGAGGAAGGTAAAAGAAAAGCAAGTCTAGTGTTCCACGAATTCTTGAATTTTCTTCTTCTCGCAATGGCGGCTTCGGTTGATAACCGTCAACAAGGCAGCCACATAGACGGCGTCGTTAGCGGTTGCGGTCAGGACCTCAAGCCCCCGCTGCCGTTGGATTTCGATCTGGACTCCAGCAGCGACGAAGAGGAAAACGACAACGTTTCGTACCTGAAGCGGCTGGTGCAAAAGGCGAACGCGGAAATGGAGCCCTCGTTGCTGGATCCGCGTGACGAGGGAACAGCGGACCACTGGGTCGCACGGAACGCTTCCATGGTCCGTCTCACAGGGAAGCACCCCTTCAACGCGGAGTCACCCCTCCCACGCCTCATGCACCACGGCTTCATCACCCCGGTCCCACTCCACTACGTCCGAAACCACGGTCCGGTTCCCATGGCTAAATGGGAAGACTGGACCGTCGAAATAACCGGTCTGGTCAAACGCCCAACCCGCTTCACCATGGACCGCCTCGTCTGCGAGTTCCCCCACCGCGAGTTCCCCGCCACTCTCGTCTGCGCCGGGAACCGCCGCAAGGAGCAGAACATGGTCAAGCAGACCATCGGCTTCAACTGGGGGTCGGGCGGCGCCTCCACCTCCGTCTGGCGCGGGATTCCCCTTCGCCACCTGCTGATGCGCTGCGGGATCCTCTCACGTGCGAAGGGCGCGCTGCACGTCTGCTTCGAGGGTGCTGAGGATCTACCCGGTGGCGGTGGGTCCAAGTATGCAACCAGCGTGTCCAGGGACATGGCCATGGACCCTTCCCGTGACATCATTCTAGCTTACATGCAAAACTGCGAGCCTCTTGCTCCCGATCATGGCTTCCCCGTTCGCATGATCATTCCAGGGTTCATCGGTGGCCGAATGGTGAAGTGGCTCAAACGCATTGTCGTTTCTTACCATGAGTGCAAGAGTCATTATCATTTCAAGGATAACAGAGTACTCCCTCCCCACGTTGACGCTGAACTTGCTACTGAAGAAGGTTGGTGGTATAAACCGGAGTATATCATCAACGAGTTGAACATAAACTCAGTGATAACCACGCCGTGTCACGAGGAGATCTTGCCCATCAACTCATGGTCTACGCAGAGTCCTTATGTGATAAGAGGATATGCATATTCTGGTGGAGGAAGAAAAGTGACCAGAGTTGAGGTAACCCTGGATGGTGGAGAAACCTGGCACGTGTGTACACTGGACCATACTGAGAAACCCAACAAATATGGCAAGTACTGGTGCTGGTGCTTCTGGTCTTTGGAGGTGGAAGTGCTGGATCTGTTTGGGACCAAAGAGATTGCAGTTCGAGCTTGGGATGAGGGTCTCAACACTCAGCCTGAAAACCTCATTTGGAATGTTATGGGAATGATGAACAACTGCTGGTTCAGAGTGAAAACAAATGTGTGCAAGCCCCACAAGGGTGAGATTGGCATAGTGTTTGAACACCCCACCCAACCAGGGAACCAAGCCGGAGGGTGGATGGCGAAGGAGAGACACTTGGAGAAATCACATGAACCAAAACCAAGCCTCAAGAAGAGTGTCTCCACGCCATTCATGAACACTGCCTCAAAAATGTTCTCCATAACCGAAGTCAAAAAACACAGCACCCCCGACTCCGCTTGGATCATCGTCCACGGCCACGTCTACGACTGCACCCGCTTCCTCAAAGACCACCCCGGCGGCACCGACAGCATCCTCATCAACGCCGGCACCGACTGCACCGAAGAATTCCACGCTATTCATTCCGACAAAGCAAACAAAATGCTCGATGATTACCGAATCGGCGAACTCATTACCACAGGGTACACCTCAGGCTCATCATCCCCTAACAACTCGGTGCATGGAAATTCCGAATTTACCCATTTGGCCCCAATTAAGGAAATTACCATAACACCACCAGGCAGTGGGGCCCTTAACCCAGGCGAGAAGATCCCGTGCAAGCTGGTGGCGAAGACCTCCATTTCCCACGACGTGAGGCTCTTCCGTTTGGCGTTACCCTCAGAGGATCAACTTTTAGGGTTACCAGTGGGGAAGCATATTTTTCTATGCACCAGCATCGATGGGAAACTATGCATGCGAGCCTACACTCCAACAAGTGGCGTAGACGAAGTGGGGTTCTTCGATTTACTCATCAAGGTGTATTTCAAAGGGGTGCACCCTAAGTTCCCCAACGGAGGAGTCATGTCGCAGCATTTGGAGTCTCTGGAGATTGGGTCCACGATGGACGTGAAGGGCCCACTGGGCCACATAGAGTACAGGGGGAGAGGCAACTTCACGGTCCACGGAAAGCCCAGATTCGCGAAGCGTCTTGCCATGCTGGCTGGTGGGACCGGGATCACGCCGGTTTACCAAGTGGCGCAGGCGATTCTGAAGGACCCAGAGGACCGAACCGAGATGCACGTGGTGTACGCGAACCGAACAGAAGAAGACATACTGCTGAGGGAAGAGTTGGACGCATGGGCCAAGGAACATCGTGACCGGTTCAAGGTGTGGTACGTGGTCGAAACTGCTAAGGAAGGGTGGGGATACAGTGTGGGCTTCATCACGGAAACTATCATGAGGGAGCACCTTCCCCAAGCATCCAAAGATGCCATGGCTTTAACGTGTGGGCCACCACCCATGATTCAGTTTGCGGTGCAGCCTAATTTGGAGAAGATGGGTTATGATGTCAAGAATGATTTG 2734 0.5395 MAASVDNRQQGSHIDGVVSGCGQDLKPPLPLDFDLDSSSDEEENDNVSYLKRLVQKANAEMEPSLLDPRDEGTADHWVARNASMVRLTGKHPFNAESPLPRLMHHGFITPVPLHYVRNHGPVPMAKWEDWTVEITGLVKRPTRFTMDRLVCEFPHREFPATLVCAGNRRKEQNMVKQTIGFNWGSGGASTSVWRGIPLRHLLMRCGILSRAKGALHVCFEGAEDLPGGGGSKYATSVSRDMAMDPSRDIILAYMQNCEPLAPDHGFPVRMIIPGFIGGRMVKWLKRIVVSYHECKSHYHFKDNRVLPPHVDAELATEEGWWYKPEYIINELNINSVITTPCHEEILPINSWSTQSPYVIRGYAYSGGGRKVTRVEVTLDGGETWHVCTLDHTEKPNKYGKYWCWCFWSLEVEVLDLFGTKEIAVRAWDEGLNTQPENLIWNVMGMMNNCWFRVKTNVCKPHKGEIGIVFEHPTQPGNQAGGWMAKERHLEKSHEPKPSLKKSVSTPFMNTASKMFSITEVKKHSTPDSAWIIVHGHVYDCTRFLKDHPGGTDSILINAGTDCTEEFHAIHSDKANKMLDDYRIGELITTGYTSGSSSPNNSVHGNSEFTHLAPIKEITITPPGSGALNPGEKIPCKLVAKTSISHDVRLFRLALPSEDQLLGLPVGKHIFLCTSIDGKLCMRAYTPTSGVDEVGFFDLLIKVYFKGVHPKFPNGGVMSQHLESLEIGSTMDVKGPLGHIEYRGRGNFTVHGKPRFAKRLAMLAGGTGITPVYQVAQAILKDPEDRTEMHVVYANRTEEDILLREELDAWAKEHRDRFKVWYVVETAKEGWGYSVGFITETIMREHLPQASKDAMALTCGPPPMIQFAVQPNLEKMGYDVKNDL 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01904 883 PANTHER SULFITE REDUCTASE 58 460 - -
Pste8g01904 883 Gene3D - 737 881 IPR039261 -
Pste8g01904 883 Pfam Oxidoreductase molybdopterin binding domain 119 298 IPR000572 -
Pste8g01904 883 MobiDBLite consensus disorder prediction 1 44 - -
Pste8g01904 883 PIRSF Nitr_rd_NADH 9 883 IPR012137 GO:0006809|GO:0042128|GO:0050464
Pste8g01904 883 Pfam Cytochrome b5-like Heme/Steroid binding domain 518 586 IPR001199 -
Pste8g01904 883 Gene3D Translation factors 623 736 - -
Pste8g01904 883 FunFam Nitrate reductase 330 506 - -
Pste8g01904 883 Pfam Oxidoreductase NAD-binding domain 761 868 IPR001433 GO:0016491
Pste8g01904 883 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 136 171 IPR022407 GO:0043546
Pste8g01904 883 SMART Cyt_b5_2 515 587 IPR001199 -
Pste8g01904 883 PRINTS Cytochrome B5 signature 562 569 IPR001199 -
Pste8g01904 883 PRINTS Cytochrome B5 signature 574 586 IPR001199 -
Pste8g01904 883 PRINTS Cytochrome B5 signature 547 561 IPR001199 -
Pste8g01904 883 PRINTS Cytochrome B5 signature 537 547 IPR001199 -
Pste8g01904 883 FunFam NADH-cytochrome b5 reductase 623 736 - -
Pste8g01904 883 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 543 550 IPR018506 GO:0020037
Pste8g01904 883 Gene3D - 508 589 IPR036400 -
Pste8g01904 883 PRINTS Cytochrome B5 reductase signature 798 809 - -
Pste8g01904 883 PRINTS Cytochrome B5 reductase signature 661 672 - -
Pste8g01904 883 PRINTS Cytochrome B5 reductase signature 760 779 - -
Pste8g01904 883 PRINTS Cytochrome B5 reductase signature 854 862 - -
Pste8g01904 883 PRINTS Cytochrome B5 reductase signature 682 689 - -
Pste8g01904 883 PRINTS Cytochrome B5 reductase signature 727 741 - -
Pste8g01904 883 FunFam Sulfite oxidase, mitochondrial 510 590 - -
Pste8g01904 883 Pfam Oxidoreductase FAD-binding domain 635 741 IPR008333 -
Pste8g01904 883 SUPERFAMILY Riboflavin synthase domain-like 626 743 IPR017938 -
Pste8g01904 883 CDD eukary_NR_Moco 70 455 - -
Pste8g01904 883 CDD cyt_b5_reduct_like 635 881 - -
Pste8g01904 883 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 511 589 IPR036400 -
Pste8g01904 883 PRINTS Eukaryotic molybdopterin domain signature 85 99 IPR008335 GO:0016491
Pste8g01904 883 PRINTS Eukaryotic molybdopterin domain signature 328 340 IPR008335 GO:0016491
Pste8g01904 883 PRINTS Eukaryotic molybdopterin domain signature 373 385 IPR008335 GO:0016491
Pste8g01904 883 PRINTS Eukaryotic molybdopterin domain signature 160 171 IPR008335 GO:0016491
Pste8g01904 883 PRINTS Eukaryotic molybdopterin domain signature 261 274 IPR008335 GO:0016491
Pste8g01904 883 PRINTS Eukaryotic molybdopterin domain signature 400 410 IPR008335 GO:0016491
Pste8g01904 883 PRINTS Eukaryotic molybdopterin domain signature 244 260 IPR008335 GO:0016491
Pste8g01904 883 PRINTS Eukaryotic molybdopterin domain signature 277 290 IPR008335 GO:0016491
Pste8g01904 883 PRINTS Eukaryotic molybdopterin domain signature 107 123 IPR008335 GO:0016491
Pste8g01904 883 PRINTS Eukaryotic molybdopterin domain signature 171 183 IPR008335 GO:0016491
Pste8g01904 883 PRINTS Eukaryotic molybdopterin domain signature 438 451 IPR008335 GO:0016491
Pste8g01904 883 PRINTS Eukaryotic molybdopterin domain signature 186 201 IPR008335 GO:0016491
Pste8g01904 883 PRINTS Eukaryotic molybdopterin domain signature 359 373 IPR008335 GO:0016491
Pste8g01904 883 PRINTS Eukaryotic molybdopterin domain signature 425 437 IPR008335 GO:0016491
Pste8g01904 883 Gene3D - 330 504 - -
Pste8g01904 883 FunFam Nitrate reductase [NADH] 737 883 - -
Pste8g01904 883 FunFam Nitrate reductase 71 320 - -
Pste8g01904 883 Pfam Mo-co oxidoreductase dimerisation domain 326 457 IPR005066 GO:0016491|GO:0030151
Pste8g01904 883 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 67 328 IPR036374 -
Pste8g01904 883 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 630 742 IPR017927 GO:0016491
Pste8g01904 883 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 798 809 IPR001709 GO:0016491
Pste8g01904 883 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 830 846 IPR001709 GO:0016491
Pste8g01904 883 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 546 556 IPR001709 GO:0016491
Pste8g01904 883 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 854 862 IPR001709 GO:0016491
Pste8g01904 883 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 786 795 IPR001709 GO:0016491
Pste8g01904 883 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 682 689 IPR001709 GO:0016491
Pste8g01904 883 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 760 779 IPR001709 GO:0016491
Pste8g01904 883 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 512 587 IPR001199 -
Pste8g01904 883 MobiDBLite consensus disorder prediction 1 16 - -
Pste8g01904 883 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 729 880 IPR039261 -
Pste8g01904 883 Gene3D - 69 319 IPR036374 -
Pste8g01904 883 SUPERFAMILY E set domains 330 457 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01904 Pste-Chr8 14164439 14171277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01904 627 877 NADPH P450 reductases AT5G17770 40.316 2.17e-52 182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01904 8 14164439 14171277 Pste8g01904 8 14164439 14171277 ECH