Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01902 CATTACATATGTCACCGCAAAAAGTAACCAAGTATAAAAAAACTTTAATTTTCAAAAAACCATATTAAGATATGATGAAATGTATTTTATAGATGGAAATTGTGAAGCCCTAAAAAGAGAGAAGAGGAGAAAAGGAGAGAGGAAATAAAAAAGAAGTGTAGATTTAAGGCGGGCGGAGGAGAAAGTCGAAAAACAAGTCCAGTTGGGCAATCCGAGTCAGGCATGGTTGTCCACGTGGCAGCGCGTTTTCTGTCTCTTTTTTACATTAGCGTTTACCAGCTCTTCTCTCACGCTCACTTTGTTTCTTCCCCTTTCCCATTTCAATCTCCGTTCCTCCTTCTCTAACCGCATCAACTTGTTGGAAGGCGAAACCCTGCTTTTCAATCCGACGGCGTTTTTAGATGGATTTAGTGAGCCATGAATCACTTACCTCGAATATTCGGCCATAGAAAGCAAGCCCCCAACATGGACCCGAGGAAGAGCAGCAAGGCGCGAAGCAAGCGCCAGCAGCCAAGCTCGAGCGCCGCAACGCCGCCAAGAACTTCGAATACGACGCCGGATCGTCCTCCTCCTCCCGCGGTGATGACTCCACCGCTTCCTCCTCCTCCTCCTCCTCCTCCTCCCTCATGCACACGCGCTCCATGGAGTTCTACGACCGCACGAGCTTCCGCATCGAGGGCGTCGAGGGCGAGTTCGACCGCATTTGCCGCAGCCTCGGCCTCTCCGGTCCGGAGGACTTCTCCATTCCGCCGGCGGTTTGGGAGGCCATGAAGCTTCGCTCCTCCTCCGACATCTTGCCGCCGAGACCGAACCCCGCCCGCCAGGAGAAGGGGAAGGAGGATTTTGGAGTGGCGGAGAGTGACGATCGGGCTAGGGTTTTGGATGAGTGTGTTGTTCCTGCTGAGAGCAGTGCTTGCTGCGGCGGCGGTGGAGTTAAAGGTTTTCGGCCTCCGATGCTGAAGCCGCCGCCAGGGGCTAGGGTTGTGGTGGTGGACGACGACACGTGTTCCACGTGGGATTTGCTTCGGGATTTTGCCCCAAAAGAGGAAGACGGGAAGGGGAGTTACGTGGCGTTGAGTTATTCCGATGGTGAAGATGATGGCCGAGAAGAGAAGGTGGAGGAGGACGAAGAAGTTAGTGGAGTGAGGGAGAAGATAGAGGAAGAGGTAAATGCGGCGAGGATTGCGGAAATTGTGGGTGATTTTTCGGGGTTTTCTACTTCGAACGAGGATGATTCTTCTAGCACTACCACGGGGCCTAGGTCGAATAATATATCTCCTAATGCTAGAATCAAGCGTGTGATTACCGCGGGTAATTGGCAAAAAGGGGAGCTTTTGGGGCGTGGTTCGTTTGGTTCTGTGTATGAAGGGATTTCTGAAGATGGATTCTTTTTTGCTGTAAAAGAAGTTTCACTACTTGATCAAGGGAATCAGGGAAGGCAAAGTGAAATTGATCTTTTGAGTCAATTTGAACATGAGAATATAGTTCAATACATTGGCACTGAAATGGACGCATCAAATCTGTATATCTTTATTGAGCTTGTAACCAAAGGTTCTCTTCGGAACCTCTACCAGAGATACACTCTTCGAGATTCTCAAGTATCTGCCTATACAAGACAGATTTTGCATGGTCTTAAGTATCTTCATGATCGAAATGTTGTTCACAGGGATGTTAAATGTGCAAATATATTGGTGGATGCAAATGGATCTGTTAAACTTGCAGATTTTGGATTAGCTAAGGCAATCAAATTGAATGATGTTAAATCATGCAAAGGAACAGCTTTGTGGATGGCCCCAGAGGCTTCTAGCAGAGAGTTTCTTCTCTATGGAAAACTTTCTCTTGCAAGTTGCAAATTTTTGTTCTTTGGTTTCCATTATTGGTCTGACCATCCAATGTCCGCAACTTCAACAACTTCTGTCTTGGGGATCTATTATACATTTGACTACAATGTACACAACTTCAACCTCAAGGGCATGGCTGCCTTTATTGGGGATGACAATGATAAAACCCTACGTGTTGATTGGGAAAGTGGGCCTAAGCATGATTATTACCAAAAGGGATGGGAGTTATATTGTTATAAAGAGTTGTGGAAGCAGAGTACATCTCTCGGCATTCTCATTGTTGTAAGAGGGAAACAAACAGGTTATGGACTTCCAGCTGATATATGGAGTCTGGGATGCACTGTGTTGGAGATGTTAACGGGCCAACTTCCATACTCTGACTTTGAATGTATGCAGGCTTTGTTTAGAATTGGAAGAGGTGAGCCACCTGTTGTGCCTGATTCTCTTTCAAAAGATGCACGGGATTTTATTCTCCAGTGTCTCAAAGTTAATCCGGATGAACGTCCCTCTGCTGCTCAACTCTTAAACCATACCTTTGTCCAAAGACCACTGCATTCTCAGTCCTCTGGTTCTGCATCTCCTTATATTAGAAGGGCTTAAACTTGTCACCTCCAACTTGAAACATAATGAAGGTTCAGATAAGGTTGGCAAGAAGCACTGCAACTGCAAGTTCTGTCTCGTGATCACAAGGAACCTTAGGTTTGTTAAGATCTTGTTCATACGTGAAATTAAGAATCCGAAAGACATGCGTTTTGATTGATGTGATGGATGTGAGATGGACATGGTTGTCACTGTTTTTGTTTTCCAAATAGAATGCAAATGGTCAAATTTTAGAGTTCTTACGATCCCTGTTTCGTAGGTATAGGAGATCAAGATACATTGGATTCAATCCTGAGCATTGAAAGTGATGCTTTATTTTTCTCTGTTCTAATGATTTATTTATTTACAGGATGAATTTTGTTTAATTATTCATCTTTTCTTTCTGCTGTTTGGTAGGATTATGAAATGTGTTTGTACTGAGTTGAATGCCTTGAGCTCGTTAAATCTTTGGGTTAAGCAGTGGCAGAT 2909 0.4503 MHTRSMEFYDRTSFRIEGVEGEFDRICRSLGLSGPEDFSIPPAVWEAMKLRSSSDILPPRPNPARQEKGKEDFGVAESDDRARVLDECVVPAESSACCGGGGVKGFRPPMLKPPPGARVVVVDDDTCSTWDLLRDFAPKEEDGKGSYVALSYSDGEDDGREEKVEEDEEVSGVREKIEEEVNAARIAEIVGDFSGFSTSNEDDSSSTTTGPRSNNISPNARIKRVITAGNWQKGELLGRGSFGSVYEGISEDGFFFAVKEVSLLDQGNQGRQSEIDLLSQFEHENIVQYIGTEMDASNLYIFIELVTKGSLRNLYQRYTLRDSQVSAYTRQILHGLKYLHDRNVVHRDVKCANILVDANGSVKLADFGLAKAIKLNDVKSCKGTALWMAPEASSREFLLYGKLSLASCKFLFFGFHYWSDHPMSATSTTSVLGIYYTFDYNVHNFNLKGMAAFIGDDNDKTLRVDWESGPKHDYYQKGWELYCYKELWKQSTSLGILIVVRGKQTGYGLPADIWSLGCTVLEMLTGQLPYSDFECMQALFRIGRGEPPVVPDSLSKDARDFILQCLKVNPDERPSAAQLLNHTFVQRPLHSQSSGSASPYIRRA 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01902 604 Pfam Protein kinase domain 232 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01902 604 Pfam Protein kinase domain 503 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01902 604 MobiDBLite consensus disorder prediction 53 77 - -
Pste8g01902 604 ProSitePatterns Serine/Threonine protein kinases active-site signature. 344 356 IPR008271 GO:0004672|GO:0006468
Pste8g01902 604 SUPERFAMILY Protein kinase-like (PK-like) 225 586 IPR011009 -
Pste8g01902 604 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 113 391 - -
Pste8g01902 604 ProSiteProfiles Protein kinase domain profile. 231 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01902 604 Gene3D Transferase(Phosphotransferase) domain 1 449 596 - -
Pste8g01902 604 Gene3D Transferase(Phosphotransferase) domain 1 228 403 - -
Pste8g01902 604 ProSitePatterns Protein kinases ATP-binding region signature. 237 259 IPR017441 GO:0005524
Pste8g01902 604 SMART serkin_6 231 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01902 604 MobiDBLite consensus disorder prediction 195 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01902 Pste-Chr8 14097176 14109143 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01902 498 589 MAP Kinase Kinase Kinase AT4G08500 72.826 2.43e-37 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pste8g01902 Pkinase 9.8e-45 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01902 8 14097176 14109143 Pste8g01902 8 14097176 14109143 ECH
Pste8g01902 8 14097176 14109143 Pste2g02927 2 29261172 29268159 PCT