Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01891 CTCGAAGACCACTATCAACTGAATAAGAAAAGCTGTGGACTTGATTCTACCAAGCTAGCTAGCTACCTATTCTGTTCTCAGCTGTGTTTGTATTGGTCAGTATATGAACTCTTCATCAACCCAACTCGTCCTCACGAAAAGGATGGGTATATATGATCCTTTCCATCAAGTGAACATGTGGGGAGACAGCTTTAAAATTGATGGAAGCTTGAACTCAATTGCTCCCCCAATGTTAATGAGGAAGCCTACCATGCAGAACAAGTCTGAATGCACTCCTCATGAATCAAGAGAACCTTCTGGAGATGATCAAGAGACAAATGACAAAGCTGATAGTAAGGCACTGAGACGTCAAGCTCAAAATCGTGAGGCTGCTCGAAAATGTCGGCTGCGCAAGAAGGCTTATGTTCAACAATTAGAAACAAGTCGTGTGAAGCTGATGCAATTGGAGTTGGAGATTGAGAAAGCAAGAACGCAGGGTATATTCATACGAAGTGCACTAGATGTTAGTTATATGGGATCATCTGGAACAATTAACCCAGGGATAACATTGTTTGAACTTGAATATGGACAATGGATTGAAGAGCAAGATAGACAGAATCAAGAGCTGAGAAATGCATTACAAACTCATGCATCTGATATGCAACTTCATCTACTTGTTGACAATTGCTTGAACCACTACTCAAATCTTTTCAAGATGAAAGCAGAAGCTGCAAAGGCTGATGTCTTTTATTTAATATCTGGTGCATGGAAAGCATCAGTGGAACGCCTTTATCTTTGGATTGGAGGATCCCGTCCATCACAGCTTCTAAATATCATTGTACCACAGCTTGATCCCTTGACTGATCCACAAATTGTGAGCATTAACAACCTCCGGCTTTCATCTCAGCAAGCTGAAGATGCCCTATCACTAGGATTGGACAAACTCCAGCAGAGTCTGGTCCACAACATACCATCAGATCCCTTGGTTGTAGGACACTATGGATTTGAGATGGCTGCTGCCATGGACAAAGGTGAAGCACTAGAAGGTTTTGTAAACCAGGCAGATCACCTTAGGCAACAAACACTGATTCACATGTCTCGTATCCTCACAACTGGCCAAGCTGCTCAAGCCTTGCTAGCTATGGGAGAATACTTTCATCGCCTTAGAACTCTTAGTTCTTTATGGAGTGCTCGTTCATGTGATCCTCATCATTCCTTTCCCACTCAACTCTAAAACTGAGATCACTTTCTATGAACCTCAACAGTTATGTGGTTGTCTGGTTGACACAACAGAGGCTCAAATCTTTGTTTTGTTTAATATGTATATGTATATGATGGTAGTTAATATTAATGGTGCCTAGCTAGTACCATGAAGGCTGAAGCAAAGTTTATATGAATTGTTGATCTAGAGAACATGTGAACCACACTTTGTACATAACTATTGTACCATCTTCCACATGGAATCGTGAAAAAGGATTTAGGCCAACTTTAGATAAATTTCTC 1482 0.4103 MNSSSTQLVLTKRMGIYDPFHQVNMWGDSFKIDGSLNSIAPPMLMRKPTMQNKSECTPHESREPSGDDQETNDKADSKALRRQAQNREAARKCRLRKKAYVQQLETSRVKLMQLELEIEKARTQGIFIRSALDVSYMGSSGTINPGITLFELEYGQWIEEQDRQNQELRNALQTHASDMQLHLLVDNCLNHYSNLFKMKAEAAKADVFYLISGAWKASVERLYLWIGGSRPSQLLNIIVPQLDPLTDPQIVSINNLRLSSQQAEDALSLGLDKLQQSLVHNIPSDPLVVGHYGFEMAAAMDKGEALEGFVNQADHLRQQTLIHMSRILTTGQAAQALLAMGEYFHRLRTLSSLWSARSCDPHHSFPTQL 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01891 369 FunFam BZIP family transcription factor 77 126 - -
Pste8g01891 369 Coils Coil 158 178 - -
Pste8g01891 369 MobiDBLite consensus disorder prediction 56 89 - -
Pste8g01891 369 MobiDBLite consensus disorder prediction 49 89 - -
Pste8g01891 369 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 81 96 IPR004827 GO:0003700|GO:0006355
Pste8g01891 369 SMART brlzneu 74 134 IPR004827 GO:0003700|GO:0006355
Pste8g01891 369 Pfam bZIP transcription factor 77 112 IPR004827 GO:0003700|GO:0006355
Pste8g01891 369 SUPERFAMILY Leucine zipper domain 79 111 IPR046347 GO:0003700|GO:0006355
Pste8g01891 369 Gene3D - 77 129 - -
Pste8g01891 369 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 76 111 IPR004827 GO:0003700|GO:0006355
Pste8g01891 369 Coils Coil 97 124 - -
Pste8g01891 369 ProSiteProfiles DOG1 domain profile. 147 357 IPR025422 GO:0006351|GO:0043565
Pste8g01891 369 Pfam Seed dormancy control 165 239 IPR025422 GO:0006351|GO:0043565
Pste8g01891 369 PANTHER TRANSCRIPTION FACTOR TGA9 2 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01891 Pste-Chr8 13922634 13927768 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01891 2 361 Calmodulin-binding Proteins AT1G77920 54.278 7.70e-136 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pste8g01891 DOG1 1.4e-27 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01891 8 13922634 13927768 Pste2g02890 2 28988568 28992531 PCT