Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01879 CAACTTGGAACAGATAGTAAGTAACAAATGAAGAAGGTTTCAATCTTCGTCATCTCCATGCTGTATTTCCATCTACTCGTCCACGTTTCTTCGTCACCTTTCTTATATGCAACTCAGGTCTATGAGGAATCCTCTGGTGGAAGAAATCTTAAACAGAAACACGAACAGGAGAATGCTCAAGAAGTGCATTGCTCCAGGGAGAGAAGTAGGGCAGCCAGGAAAGTGATAGAGGAGTATTTGACACCATTTGTGGAGCGAGAAAACTACCAGCTTTCAAGTAAGTGCAGACTTCACCCTGATAATGATATATTCTGGGATCAGGAAGAGCATAAAATTTACATAGATAGAAATGAATGGCGGTGTGGATATTGTAAGAAAAGCTTTCGGGAAGAAAAATTTCTTGATCAGCATTTTGATAACAGACACTACAATCTTCTGAATCTAAGTCATGGTAGGTGCTTGGCTGATTTTTGTGGGGCATTGCATTGTGATGCTGTGATGAATTCCAAATCCTCTAGAAGCAAGTGTAATCCAGAAGCTGCTGCAAGAAACCTTCATCTATGTGAGAGTCTTGCTGATGAGTGTTTTCCTATAAGTGAGGGTCCATCAGCAGGCCGGCTTCATGAATTGTTTCTGCACCAATTTTGTGATGCTCACACTTGCTCAGGGAAGCATAAACCCTTTTCTAGAGGAGGCAAGTCACAGTACCTTTCCCTTTCCATTGGGAAGTTAATACCTATCAATAAAGCTGGTATTTGTCGATCGTTATATTTGCTTCTGCAGGATCAAAGCAGTTTCCTTCGCTTGGCTGCTGGAGCATTGATCTTGGTTCTACTTCCTGTGTTCTATCTTTTTCTTTATTTGATACAAAGCGATGTGAAGGGTCGAACCCAAGAGCTTCGACGCATCTCAAAAGATGCATGGAAAACAAAGCCATCATGATTGGGCAATCAAGAAAGACTAATCGGCATGAATTGAAGAGACTTTTAAGCAGCCAACGGTGCGTTTAAACCTATCCAGTTCAACAGTGTTATCTTCATGTTAGAATTGAAGATGAGCTTAATGATTTGTGCACATTTGAATGCTCAACTGTGCATTTACCATGCCATGTTGATAGGATGCAGCTACTGATTTGTCTGCATTTAAATGTTGTCTAATGTAGCATTTCAACGTACTTAGTTCACTTTAGATTGATACGAAAAATTGTTTTGTTGTAAAACTTTTGATAGCTAAAAGACAGTGTAACACAATACTTCTCCTATTCTCTACTTTGTAAGTTCAGGTTTGTGCATATCAAACTTGAAAAAAATCAAGGGTCAATCTTATGATATTGGTAATGGATATCACTTATTAATGATCTCCTTCTATGTTTTTTTAGACGTAACACTAAATTCTCACGTTGGAAAAAGCGGAATGATAGATTCCTCTTATTTCTATTCGAGTCAGCTTTAACAACTGATTTTACTGACTTGTTAGTATGGAAGACAGACATCGCAGATCTTCACTTCAATCATAGGAAGCAGAAAGGACCAGATTTGGACACGTTACAATAGCACAAAAACCGTCGATCTATCCATTTCGTATTCTTATTTGACTTTGATTTGTTTCTTTCTAATTCTTGTTTTTATCATTCAATTGAGTAGATTGTTTCGTTCATG 1658 0.3824 MKKVSIFVISMLYFHLLVHVSSSPFLYATQVYEESSGGRNLKQKHEQENAQEVHCSRERSRAARKVIEEYLTPFVERENYQLSSKCRLHPDNDIFWDQEEHKIYIDRNEWRCGYCKKSFREEKFLDQHFDNRHYNLLNLSHGRCLADFCGALHCDAVMNSKSSRSKCNPEAAARNLHLCESLADECFPISEGPSAGRLHELFLHQFCDAHTCSGKHKPFSRGGKSQYLSLSIGKLIPINKAGICRSLYLLLQDQSSFLRLAAGALILVLLPVFYLFLYLIQSDVKGRTQELRRISKDAWKTKPS 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01879 304 ProSitePatterns Zinc finger C2H2 type domain signature. 112 133 IPR013087 -
Pste8g01879 304 PANTHER ZINC FINGER PROTEIN-RELATED 9 302 - -
Pste8g01879 304 ProSiteProfiles Zinc finger C2H2 type domain profile. 110 133 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01879 Pste-Chr8 13739065 13743813 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01879 28 304 C2H2 Transcription Factor Family AT5G63280 54.874 8.35e-101 295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01879 8 13739065 13743813 Pste8g01879 8 13739065 13743813 ECH