Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01876 ATGAGAGAACAAGTGGTCTTTCATCAAGAGAATCATGATCAGACAGAGAGGACCAAGTGGGTGCTTGATTCTCCCAACCCACCCCCTCTGTGGAAGAAGCTATCTAGTTCTGTCAAGGAAACCATTTTGCCTCATGGGAACAAGTTCTGCTTTTCTTCCAAGAAGAAAACTTCCCATGGACATGCAGTCTCATGCTTGAAGAACTTGTTCCCAATCATTTGTTGGTTAAGAGATTACAAAGCTTCCAAGTTCAAAGATGATCTCTTAGCAGGCTTAACTCTTGCCAGCCTCAGCATACCTCAGAGCATAGGATATGCTACTTTAGCAAAAGTTGCTCCTGAATATGGCCTGTATACCAGTGTTGTTCCTCCTCTTATTTATGCTCTGATGGGCAGTTCAAGAGAAATTGCAATTGGACCTGTAGCTGTAGTGTCAATGCTGTTATCCTCGCTGGTCCCGAAAGTCGAAGATCCCGTTGCTAATCCTCATGCCTACAGAAATCTTGTCTTTACTGTGACCTTCTTCACTGGAATTTTTCAAACTGCATTTGGTGTTTTCAGGTTGGGTTTTCTTGTGGATTTTCTTTCACATGCTGCCTTAGTAGGATTCATGGCAGGTGCTGCCATCATTATTGGTCTTCAGCAGCTCAAAGGGTTGCTGGGGATTACTCACTTTACCTCCAAAACAGATGTAGTATCAGTATTGACATCTGTTTATAAGTCACTACATCATCAAATTACATCTGGAGAAAAAAAATGGAACCCTCTGAATTTTGTCCTGGGGAGTTCATTCTTGATTTTCATTCTAATAACCCGTTTCATTGGCAGAAGAAATAGAAAGCTTTTCTGGTTGCCTGCTATTTCTCCTCTTTTATCAGTTATACTATCAACTTTGATTGTGTATTTGTCAAGAGCTGATAAGCATGGGGTTAATATAATAAAGCATGTCAAAGGAGGTCTGAACCCTAGTTCTCTTCACCAGTTGCAATTCCATGGTCCACATGTTGGACAAGCCGCAAAATATGGGTTGATTTGTGCAGTTATTGCCCTCACTGAAGCAATAGCAGTTGGTCGATCTTTTGCTTCTATTAAGGGATACCATCTAGATGGGAACAAAGAAATGTTGTCAATGGGGTTCATGAACATTGCAGGATCTTTAACTTCATGCTATGTGGCAACTGGTTCGTTCTCAAGGACTGCAGTGAATTTCAGTGCAGGGTGTCAAACTGCAGTGTCAAATATTGTGATGGCTGTTACAGTGTTTGTGTCCTTGGAATTACTTACAAGGCTTTTATACTACACCCCTGTGGCTATCCTTGCTTCTATCATCATCTCTGCTCTTCCTGGATTAATTGACCTAAGTGAGGCTTGCTATATATGGAAGGTTGACAAATTGGACTTTGTTGCCTGTATTGGTGCCTTTCTTGGTGTCTTGTTTGCATCAGTAGAGATTGGCCTTCTTGTTGCAGTGATAATTTCGTTTGCAAAGATACTAATACAATCAATTAGACCTGGAATAGAAGTTCTAGGTAGAGTTCCAAGAACAGAAGCTTTCTGTGATGTGACACAATATCCCATGGCCATAAGCACTCCAGGCATAATAGTGATTCGCATAAGTTCTGGCTCACTCTGCTTTGCAAATGCTAGCTTTTGGGTCTCACAAGATGAAGATGACCTTAAAGAACCCCCCAAGGGTAGGGTCCAAGCTGTAATTCTGGACATGACAAACCTGATGAATGTTGATACATCTGGAATTCTAGCTCTTGAGGAACTGCACAAGAGGTTGCTTTCTCGTGGGGTAGAGTTAGCTATGGTCAATCCAAGGTGGCTAGTAATTCACAAGCTTAAACTTGCACACTTTGTAGACAAAATTGGAAAAGAGTGGGTTTTCCTTACAGTTGGAGAAGCTGTAGACGCATGTCTCTCTGCCAAAATTGCAAGAGCCTGATTGATAATGATATCATGTGGCCATGCACCGATTCTAAACTTAATTTATTGCACAGCGTGTGGGTTTTGTTTAAAATGCTAGTGCGATATTGCATAAATTTGCTTGATATATTTTGTTAAAACCACCTTGTTATAGTATCTCAATTTTGGAGACAGAATGATGTCATTACATGCGAATAAACTCAAAAT 2135 0.4084 MREQVVFHQENHDQTERTKWVLDSPNPPPLWKKLSSSVKETILPHGNKFCFSSKKKTSHGHAVSCLKNLFPIICWLRDYKASKFKDDLLAGLTLASLSIPQSIGYATLAKVAPEYGLYTSVVPPLIYALMGSSREIAIGPVAVVSMLLSSLVPKVEDPVANPHAYRNLVFTVTFFTGIFQTAFGVFRLGFLVDFLSHAALVGFMAGAAIIIGLQQLKGLLGITHFTSKTDVVSVLTSVYKSLHHQITSGEKKWNPLNFVLGSSFLIFILITRFIGRRNRKLFWLPAISPLLSVILSTLIVYLSRADKHGVNIIKHVKGGLNPSSLHQLQFHGPHVGQAAKYGLICAVIALTEAIAVGRSFASIKGYHLDGNKEMLSMGFMNIAGSLTSCYVATGSFSRTAVNFSAGCQTAVSNIVMAVTVFVSLELLTRLLYYTPVAILASIIISALPGLIDLSEACYIWKVDKLDFVACIGAFLGVLFASVEIGLLVAVIISFAKILIQSIRPGIEVLGRVPRTEAFCDVTQYPMAISTPGIIVIRISSGSLCFANASFWVSQDEDDLKEPPKGRVQAVILDMTNLMNVDTSGILALEELHKRLLSRGVELAMVNPRWLVIHKLKLAHFVDKIGKEWVFLTVGEAVDACLSAKIARA 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01876 648 Gene3D STAS domain 503 643 IPR036513 -
Pste8g01876 648 PANTHER SULFATE TRANSPORTER 43 641 IPR001902 GO:0016020|GO:0055085
Pste8g01876 648 SUPERFAMILY SpoIIaa-like 530 640 IPR036513 -
Pste8g01876 648 FunFam Sulfate transporter 31 503 643 - -
Pste8g01876 648 ProSitePatterns SLC26A transporters signature. 113 134 IPR018045 GO:0008271|GO:0008272
Pste8g01876 648 Pfam STAS domain 524 636 IPR002645 -
Pste8g01876 648 CDD STAS_SulP_like_sulfate_transporter 524 633 - -
Pste8g01876 648 ProSiteProfiles STAS domain profile. 540 640 IPR002645 -
Pste8g01876 648 Pfam Sulfate permease family 84 471 IPR011547 GO:0016020
Pste8g01876 648 NCBIfam sulfate permease 71 636 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01876 Pste-Chr8 13664481 13670308 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01876 9 645 Inorganic Solute Cotransporters AT5G10180 63.932 0.0 841
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01876 8 13664481 13670308 Pste2g02857 2 28622989 28627664 PCT