Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01875 CCTCTCCCTTTAACTCAGCTGTAAGAATTATGGTATGCTCCAGTGACAAACTTTACTAGCATAGAAGGGTGTAGGAGCCTGTCATGAATGCAATATGAATCATAGTCTTGTTGTGATTCAATGCTGCAGTTAAACGTGTTCCATCACTCATTCATGGATATAAAAATTTCCCCACTGTATTACAGCTGAAAGTCATTGTTGATCTCCTCAATGAGTAATTCAGCTGAGGAAAATTTTGAAACAAAAGAGATGGATGCGAGAAGTTTGTCATCTTCACATGGCCAAGAACCATATGTTCACAAGGTTGGAATTCCTCCAAGACAAAACCTTTTCAAGGAATTCCTAGCCACTGTAAAAGAAACCTTTTTCGCAGATGATCCTTTGCGCTCCTTCAAGGATCAAACTAAGTCTCGGAAGCTCATCCTCGGCGTTGAAGCCATATTCCCCATAATTAGCTGGGGGAGAAATTATAGTCTCACAAAATTTAGAGGGGATCTAATTGCTGGTCTAACTATTGCAAGTCTCTGCATTCCTCAGGACATTGGATATGCAAAGCTTGCAAATTTAGATCCAAAATATGGCTTGTACTCCAGCTTTATTCCACCACTGATTTATGCTGTCATGGGTAGTTCTCGTGACATTGCAATAGGACCAGTGGCAGTGGTTTCTCTCTTGTTGGGAACTTTGCTCCAGAACGAGATTGATCCCATTGCAAATCCAGTGGAATATCAACGACTTGCTTTTACTGCCACTTTCTTTGCTGGAATTACTCAAGCAACACTTGGGATTTTAAGGTTAGGATTTTTGATTGATTTCCTATCTCATGCTGCAATTGTTGGTTTTATGGGGGGAGCTGCGATTACAATTTCCCTTCAACAGCTTAAGGGCTTCCTTGGGATAGTAAAATTCACCAAGAAAACAGATGTTATCTCTGTTATGCATTCAGTACTGTCATCAGCACATCATGGATGGAATTGGCAAACCATAGCTATTGGGGCTACCTTTCTGGCTTTTCTTCTGATTGCCAAGTATATTGGAAAGAAGAACCCAAAATTGTTCTGGGTGCCTGCAATTGCCCCATTGATATCTGTTGTTCTCTCCACTTTTCTTGTATACATAACCCATGCTGACAAGAAGGGTGTTGCAATTGTAAAACACATAGATAAAGGGCTCAATCCTTCATCTGTGAAGGAAATTTATTTTAGGGGTGATTACCTTGGGAAAGGTTTCAGAGTTGGCATTGTGGCTGGCATGATAGCATTGACTGAAGCCTCAGCAATTGGAAGAACATTTGCTTCTATGAAGGACTATCAACTGGATGGAAACAAAGAAATGGTGGCGTTAGGAGTTATGAACGTTGTTGGTTCAATGACTTCCTGTTATGTAGCAACTGGTTCTTTTTCTCGATCAGCAGTAAATTTCATGGCTGGCTGTGAAACTGCAGTATCTAATATTATCATGTCTATTGTTGTGTTCTTAACCTTGATATTCCTCACGCCTCTTTTCAAATACACTCCAAATGCCATTCTTTCTACAATCATCATTTCTGCTGTTATCAACCTTGTGGACTATAAGGCAGCAATTTTGATATGGAAGATTGATAAATTTGACTTTGTTGCTTGCATGGGAGCATTTTTTGGGGTTGTTTTTGCCTCGGTTGAGATAGGACTTTTAATTGCAGTCTCCATATCCTTTGCAAAGATCCTATTACAAGTCACCAGGCCACGAACTGCAATTCTTGGGAAGATCCCTAGGACTACTGTCTATAGAAACATCCAACAATACCCTGAAGCCACAAGGGTTCCTGGTGTACTGATTATTAGAGTTGATTCTGCAATATATTTTTCCAACTCCAACTATGTTAAAGAAAGGATATTAAGATGGCTGATGGATGAAGAAGAACAAGTGAAAGAAGACTACCAAACAAGAATCCAATTTTTGATAGTGGAGATGTCACCTGTTACCGACATCGATACCAGCGGCATCCATGCCCTTGAAGAGTTACTTAGAAGTCTTGAGAAGAGAGATGTTCAGCTTGTTCTGGCAAATCCTGGTCCAATAGTAATAGACAAGCTCCACACCTCAAACTTTGCTGCTTTGCTGGGTGAGGACAAGATCTTCCTCACTGTTGCCGAGGCTGTTGCATACTGTTCTCCAAAGCTGGCTGAAGTACCTTGAACAAAAATTAGAAAAATGCGATTTTGTTACCATCAGTAGGGAAATCGGTGAAGAAATGAAATGGGGAGGGGGTGTTACAAGTTGTTACAAGTTGCCCTTTGTGCTGGTTAGTGCTATATGTGGTCCCTATCCTTTAAAAGTGAGAATAAAAAATATATATACATAAAGGTGTGCTTGTTTTGCACTCCAATAAGCATTAATTCAGTCCTTGGTTTGTGTTATAAGCTTCAAAAATGGAAGTTTTTCATTCCCCCTTGCTTAAAAATTTTACTTTCTCTTCCATTTTGTGATTGTAAATTTGTAATGTAATGATAATAGCAGTAGTTGTACAAGAGAAGATTAATGCAGCAGGTACATTATGTTATTCAGCTTTTAATCTGATAT 2562 0.3946 MSNSAEENFETKEMDARSLSSSHGQEPYVHKVGIPPRQNLFKEFLATVKETFFADDPLRSFKDQTKSRKLILGVEAIFPIISWGRNYSLTKFRGDLIAGLTIASLCIPQDIGYAKLANLDPKYGLYSSFIPPLIYAVMGSSRDIAIGPVAVVSLLLGTLLQNEIDPIANPVEYQRLAFTATFFAGITQATLGILRLGFLIDFLSHAAIVGFMGGAAITISLQQLKGFLGIVKFTKKTDVISVMHSVLSSAHHGWNWQTIAIGATFLAFLLIAKYIGKKNPKLFWVPAIAPLISVVLSTFLVYITHADKKGVAIVKHIDKGLNPSSVKEIYFRGDYLGKGFRVGIVAGMIALTEASAIGRTFASMKDYQLDGNKEMVALGVMNVVGSMTSCYVATGSFSRSAVNFMAGCETAVSNIIMSIVVFLTLIFLTPLFKYTPNAILSTIIISAVINLVDYKAAILIWKIDKFDFVACMGAFFGVVFASVEIGLLIAVSISFAKILLQVTRPRTAILGKIPRTTVYRNIQQYPEATRVPGVLIIRVDSAIYFSNSNYVKERILRWLMDEEEQVKEDYQTRIQFLIVEMSPVTDIDTSGIHALEELLRSLEKRDVQLVLANPGPIVIDKLHTSNFAALLGEDKIFLTVAEAVAYCSPKLAEVP 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01875 655 Gene3D STAS domain 504 651 IPR036513 -
Pste8g01875 655 FunFam Sulfate transporter 31 504 650 - -
Pste8g01875 655 Coils Coil 560 580 - -
Pste8g01875 655 CDD STAS_SulP_like_sulfate_transporter 525 640 - -
Pste8g01875 655 ProSiteProfiles STAS domain profile. 524 647 IPR002645 -
Pste8g01875 655 PANTHER SULFATE TRANSPORTER 39 648 IPR001902 GO:0016020|GO:0055085
Pste8g01875 655 Pfam STAS domain 525 643 IPR002645 -
Pste8g01875 655 NCBIfam sulfate permease 79 643 IPR001902 GO:0016020|GO:0055085
Pste8g01875 655 ProSitePatterns SLC26A transporters signature. 121 142 IPR018045 GO:0008271|GO:0008272
Pste8g01875 655 Pfam Sulfate permease family 92 472 IPR011547 GO:0016020
Pste8g01875 655 SUPERFAMILY SpoIIaa-like 526 648 IPR036513 -
Pste8g01875 655 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01875 Pste-Chr8 13643889 13649164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01875 20 653 Inorganic Solute Cotransporters AT1G22150 79.495 0.0 1015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01875 8 13643889 13649164 Pste2g02855 2 28583297 28589822 PCT