Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01862 AAGCATCCATCCTCATTTCATTTCACACCATCTCTCTCTGTTCTCTTCTCTGCCTTCTCTCTACAAAACCTTGCTTCCCATTTCTCATTATCAATTCACTCACCCCCCGACAAATTTATTTTTTTTCTTACAAGAGTTATTATTATTATTAGTGTTGGTATTGTATTAAAGTTGGTGTGGTGGTATAAAATGACGAACCGTAATGTGGTGGCTCCTATTGGAAAATCATCATCACGTGTGAATAACACGCTTGTGGAGTTGGCAATGTCGATTTCAAACTCAAATGCTCTACCTAGAGCAGCAGTGCCTGGGATAATGGCCTTGCTTGGTGGGGTTTTAGGCCTACCCCAGAAAAAGCTCTTAATGAAAAGATTGGAAGATGGAAGTGTCAAAGGAGGGGCAAAAGTTAACACATGGATTGATTCAATGAGGGCCTCTTCTCCCACTCGACTCAAATCCACACAAAACCAAGACCCCAGTCCTTGGAATCTTTACCACCCTTCGGCTCTGAACATGTTTGATCAGATTATAGGTGAGTCCAAAGGGAAGCAGATTGTGACTTTTCTTGACTATGATGGAACTCTCTCCCCAATTGTTGCAGATCCAGATAAAGCATACATGAGTAAAAAGATGAGGTCCACTTTAAAGGACATAGGAAGGCATTTCCCCACCGCCATCGTGAGTGGAAGGTGCATAGACAAGGTGTATAGCTTTGTAAGATTGGCAGAACTGTACTATGCTGGAAGCCATGGCATGGACATCAAGGGACCAACAAATAGGCGAAGTACTAAGAAAGGAAATGAAGAAGTGCTATTCCAACCCGCGAGTGAATTCTTACCCATGATAAATGAGGTGTACAATATCTTGGTGGAAAAAACAAAGCCTGTCTCAGGGGCTAAGGTAGAAAATAACAAGTTTTGCCTGTCCGTGCACTTTCGCTGTGTTGACGAAAAGAATTGGGTCTCATTGGCTGAACAAGTTAGCTTGGTCCTCAACGATTACCCAAAACTTAAGCTAACTGAAGGGAGAAAAGTGCTTGAGATTCGACCAACAATAAAATGGGACAAGGGCAAGGCTGTTGAATTCTTGCTAGAGTCACTAGGATATGCTAATTCTGATAATGTATTTCCAATCTATATTGGTGATGATCGAACTGATGAAGATGCTTTTAAGGTTTTAAGGAAGAGGGGCCAAGGGATTGGGATTCTTGTTTCTAAAATTCCAAAAGAAACCGAGGCATCCTACATTTTGCAAGATCCAACAGAGGTTGGGCAATTTTTGCGGCATTTGGTGGAGTGGAAAAGAACGAGTACCCAATACCACCAGTTGGACATTGACACCAACCCAGATTTTGGTCAAGGGGGTGGTTCCAATTATACCCCTTTCTTGTTGGAAATAGGAAATAGCTCTCTCTCTCTCTTTTTTTTCTTTTTTTTTTTTTTTAATGTAATCTATTCCTTCACACGTTTGCATGCGCATGCGGATAGTGAAAGAACTGATGTTTTATGCCGCAATTGCGAATGGCGCGTCAACCTTCTTCCTCTGAATTGTACTTGTCGTACGTGTGGACAATGTGGTATTGAAAATGAAAATCACCAACTTCGACTTCAAAAGGTGATT 1620 0.4154 KHPSSFHFTPSLSVLFSAFSLQNLASHFSLSIHSPPDKFIFFLTRVIIIISVGIVLKLVWWYKMTNRNVVAPIGKSSSRVNNTLVELAMSISNSNALPRAAVPGIMALLGGVLGLPQKKLLMKRLEDGSVKGGAKVNTWIDSMRASSPTRLKSTQNQDPSPWNLYHPSALNMFDQIIGESKGKQIVTFLDYDGTLSPIVADPDKAYMSKKMRSTLKDIGRHFPTAIVSGRCIDKVYSFVRLAELYYAGSHGMDIKGPTNRRSTKKGNEEVLFQPASEFLPMINEVYNILVEKTKPVSGAKVENNKFCLSVHFRCVDEKNWVSLAEQVSLVLNDYPKLKLTEGRKVLEIRPTIKWDKGKAVEFLLESLGYANSDNVFPIYIGDDRTDEDAFKVLRKRGQGIGILVSKIPKETEASYILQDPTEVGQFLRHLVEWKRTSTQYHQLDIDTNPDFGQGGGSNYTPFLLEIGNSSLSLFFFFFFFFNVIYSFTRLHAHADSERTDVLCRNCEWRVNLLPLNCTCRTCGQCGIENENHQLRLQKVI 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01862 540 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 124 442 IPR044651 GO:0004805|GO:0005992
Pste8g01862 540 FunFam Trehalose 6-phosphate phosphatase 275 351 - -
Pste8g01862 540 Pfam Trehalose-phosphatase 188 420 IPR003337 GO:0003824|GO:0005992
Pste8g01862 540 Gene3D - 185 269 IPR023214 -
Pste8g01862 540 Gene3D - 299 445 IPR023214 -
Pste8g01862 540 FunFam Trehalose 6-phosphate phosphatase 281 440 - -
Pste8g01862 540 NCBIfam HAD-IIB family hydrolase 188 395 IPR006379 -
Pste8g01862 540 NCBIfam trehalose-phosphatase 183 431 IPR003337 GO:0003824|GO:0005992
Pste8g01862 540 CDD HAD_TPP 188 424 - -
Pste8g01862 540 SUPERFAMILY HAD-like 188 434 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01862 Pste-Chr8 13424425 13427140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01862 174 465 Trehalose Biosynthesis Gene Families AT1G23870 24.252 4.38e-08 54.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01862 8 13424425 13427140 Pste2g02810 2 28116270 28118537 PCT