Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01840 ATGAATCAAAACCAGCTTCAGCCCCTTCCTCTGCTTAGTAGCTTCCTAGGTTCATCTCCCCAAGAAACTTTGGTACAAAACCAAAGTCCTAAAGCATGTCATGGTCAAGTTGAGGATGTCACAGTGGCCTTACACATAGGCCTCCCTGAACATTCATCAAGTGGCTCCACTAATAACAATCATGGATTTTTTAATGCCACAAATCAAGTTCCTAACAATTATTGGATACCAACTCAGGAGCAGATCCTCATTGGGTTTAGTCATTTCTCTTGTCCTGTCTGCCACAAAACCTTCAATCGCTACAACAATCTTCAGTATCGAAGAGGGCCAGATTCGCTGAAACGAACTCATCCGCGACCCTTGTTGGATATTCCATGCTACTGTTGCTCGAGAGGGTGCAAGAACAACATTGAGCACCCACGTGCGAAGCCTCTGAAGGATTTCCGCACGCTTCAGACACACTACAGGAGGAAGCATGGTGCCAAGCCCTTCACGTGCCGCAAGTGTGGCAAGCCTTTGGCTGTTAAAGGTGACTGGCGTACCCACGAGAAAAACTGTGGCAAACGCTGGCTTTGTATCTGTGGTTCTGACTTCAAACATAAGAGGTCCCTCAAAGACCACATCAAAGCCTTTGGATTTGGTCACACCCCTTTTTCTTCTTCCATCTAA 669 0.4649 MNQNQLQPLPLLSSFLGSSPQETLVQNQSPKACHGQVEDVTVALHIGLPEHSSSGSTNNNHGFFNATNQVPNNYWIPTQEQILIGFSHFSCPVCHKTFNRYNNLQYRRGPDSLKRTHPRPLLDIPCYCCSRGCKNNIEHPRAKPLKDFRTLQTHYRRKHGAKPFTCRKCGKPLAVKGDWRTHEKNCGKRWLCICGSDFKHKRSLKDHIKAFGFGHTPFSSSI 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01840 222 FunFam Zinc finger protein WIP2 133 215 - -
Pste8g01840 222 SUPERFAMILY beta-beta-alpha zinc fingers 149 184 IPR036236 -
Pste8g01840 222 Gene3D Classic Zinc Finger 125 212 - -
Pste8g01840 222 PANTHER ZINC FINGER PROTEIN WIP2 9 218 IPR043584 GO:0003700|GO:0010468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01840 Pste-Chr8 13068597 13071057 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01840 1 222 C2H2 Transcription Factor Family AT1G34790 53.386 1.37e-87 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pste8g01840 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01840 8 13068597 13071057 Pste8g01840 8 13068597 13071057 ECH