Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01809 ATGGAGTTGTGCTCTGGGGGGAGGTTGGTTGATAGAATGAGGGATGGGCCGTGGATATTAAAGCCTGAGAATATACTGCTTACTGGATCCGGGAAGGTCAAGCTTGCGGATTTCAGACTTGCTATCAGGATTTCTGAGGGTCAGAATTTGACTGGTATAGCTGGAAGCCCCGCATATGTTGCACCAGAAGTGTTGTTGGGTAGATATTCTGAGAAGGTAGATATATGGAGTTCTGGGGTGCTCCTACATGCTCTGTTGGGGCGTGGGAATCAATATCTAAACCTGCACGAGATCTTTGTTGGGAGAATGCTGACAAGGGATATTTCAGCAAGGATAACAGCTGATGAAGTACTAAGCCATCCATGGATATTGTTTTACACCGAGCAAATACTAAAGATGCTGCCTGTCAAGTCAAAATTGAAACTCCAACATGCAGCTGCTTGTCACAAGTTTGTTTCTGCACCTGAATCTGGGTTAGGAGGAATCAGGATAGATGATGGCTCCCTTGAGGATTCAAGCCCGTTTTCATCATCCTCTGGAAGTTGCAATTCAGAATATAATGATGATTGTGTGTGGATTGATGCACTTGCTACTGCAGTTTCACGTGTGAGGATATCCGAAACAAATAAGAGGACCAAGTTGTGCTGTCCTACTAGTCCAATTGATCAGCGAGGTTCATCTAACATGAAGAGTCTCTGTAAAGCATTCTGACCTACTGACAGGTTGACACTGACAGCATACACCACAGTATCGACTGCTTTAGCTGGGATTTTTTTACAATAAACTTAGGCCAACACATTCTACAGTTGGCAAAAGTTGGTTTCATTCTAACATCCCATATTAAGTTGACCTGGGTGCCACTTTTCACAAGTTTCTTTTTAGTTTGAGATCTAATTTCAGTATGCTTCTTTGGTTCCTTTGTCCATATAACTTAATAATAATTAGCTGAGAAAAATAGTTGTACAGAACTTGTACATATAATGTTAATGTGTGGATGTGTGATTTCACTTATTTAGTGAAACACTTTTACTTATTTTCTTTTGAAGGATTTTAATCATCACCAACTGCTTTTATTGTCTTAAATTTTATACAGTTGGTTTTTAAGGTGTAGCAATGGCATTATTTTATGGAACCC 1135 0.4018 MELCSGGRLVDRMRDGPWILKPENILLTGSGKVKLADFRLAIRISEGQNLTGIAGSPAYVAPEVLLGRYSEKVDIWSSGVLLHALLGRGNQYLNLHEIFVGRMLTRDISARITADEVLSHPWILFYTEQILKMLPVKSKLKLQHAAACHKFVSAPESGLGGIRIDDGSLEDSSPFSSSSGSCNSEYNDDCVWIDALATAVSRVRISETNKRTKLCCPTSPIDQRGSSNMKSLCKAF 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01809 236 Gene3D Transferase(Phosphotransferase) domain 1 20 156 - -
Pste8g01809 236 ProSiteProfiles Protein kinase domain profile. 1 123 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01809 236 Pfam Protein kinase domain 20 87 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01809 236 SUPERFAMILY Protein kinase-like (PK-like) 1 137 IPR011009 -
Pste8g01809 236 PANTHER SERINE/THREONINE-PROTEIN KINASE 20 86 - -
Pste8g01809 236 SMART serkin_6 1 123 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01809 Pste-Chr8 12623690 12626672 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01809 1 123 EF-hand Containing Proteins AT3G20410 34.807 8.88e-20 85.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pste8g01809 Pkinase 1.8e-17 CL0016