Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01806 TGTGAGACTCTCACTCACTCGATTCACCAAACACCGTCTTTCTCTTTTCTCGCGTGTCGCACGGATCGTGCAATGCGATCCATGAAAAAGAAGCGAAAGGGAAGCGAGCGGTTGAACCTGCCGGAGATTTCGAGGTCGCATTGCTCGCTGGAGCGGCGTTCTCGTCTGAACAAACGGTGCAGAGAATACGGCGTAGCGACGGTTCCGCCACGCAGCGCGTCGTTTCTTGTGACGCCGCCGCGGGGGCTGAAGCGGAAGATAGGCTGCATTGAGAAGGCGACGCAGATGGGGAGGAGCGTGAGGATCGGGGACGATTACGTCACCGGGGGCATCAAGATCGGGCAGGGGAAGTTCGGGTCGGTCAGCGTGTGCCGCGCACGTGCGGGGGGCGCGGAGTACGCGTGCAAGACCTTGAAGAAGGGGGATGAGACGGTGCACCGTGAGGTGGAGATAATGCAGCACGTGTCGGGGCACCCTGGGGTGGTGAATCTGGAGGCTGTGTATGACGACGCTGAGTGTTGGCACCTTGTGATGGAGTTGTGCTCTGGGGGGAGGTTGGTTGATAGGATGAGGAATGGGCCGTGTTCGGAACACGTGGCGGCTGGGATACTCAAGGAGGTGATGTTGGTGGTTAAGTATTGTCATCATATGGGAGTCGTGCATAGGGATATTAAGCCTGAGAATATTCTGCTTACTGGATCCGGGAAGCTCAAGCTCGCGGATTTCGGACTTGCTATCAGGATTTCTGAGGGTCAGAGTTTGACTGGTATAGCTGGAAGCCCCGCATATGTTGCACCAGAAGTGTTGTTGGGTAGATATTCTGAGAAAGTAGATATATGGAGTTCTGGGGTGCTCCTACATGCTCTGTTGGTGGGTAGTCTTCCATTTAAAGGAGATTCACCAGAAGCAGTTTTTGAGGAAGTTAAGAATGTTAAACTAGATTTTCAAACAGGGGCGTGGGAATCAATATCTAAACCTGCACGAGATCTTGTTGGGAGAATGCTGACAAGGGATATTTCAGCAAGGATAACAGCTGATGAAGTACTAAGTCATCCATGGATATTGTTTTACACCGAGCAAACACTGAAGATGCTGCCTGTCAAGTCAAAATTGAAACTCCAACATGCAGCTGCTTGTCACAAGTTTGTTTCTGCCCCTGAATCTGGGTTAGGAGGAATCAGGATAGATGATGGCTCCCTTGAGGATTCAAGCCCGTTTTCATCATCCTCTGGAAGTTGCAATTCAGAATATAATGATGATTGTGTGTGGATTGATGCACTTGCTACTGCAGTTTCACGTGTGAGGATATCCGAAACAAATAAGAGGACCAAGTTGTGGGGTCCTACTAGTCCAATTGATCAGCGAGGTTCATCTAACATGAAGAGCCTCTGTAAAGCATTCTGA 1404 0.5071 CETLTHSIHQTPSFSFLACRTDRAMRSMKKKRKGSERLNLPEISRSHCSLERRSRLNKRCREYGVATVPPRSASFLVTPPRGLKRKIGCIEKATQMGRSVRIGDDYVTGGIKIGQGKFGSVSVCRARAGGAEYACKTLKKGDETVHREVEIMQHVSGHPGVVNLEAVYDDAECWHLVMELCSGGRLVDRMRNGPCSEHVAAGILKEVMLVVKYCHHMGVVHRDIKPENILLTGSGKLKLADFGLAIRISEGQSLTGIAGSPAYVAPEVLLGRYSEKVDIWSSGVLLHALLVGSLPFKGDSPEAVFEEVKNVKLDFQTGAWESISKPARDLVGRMLTRDISARITADEVLSHPWILFYTEQTLKMLPVKSKLKLQHAAACHKFVSAPESGLGGIRIDDGSLEDSSPFSSSSGSCNSEYNDDCVWIDALATAVSRVRISETNKRTKLWGPTSPIDQRGSSNMKSLCKAF 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01806 467 ProSitePatterns Protein kinases ATP-binding region signature. 113 136 IPR017441 GO:0005524
Pste8g01806 467 SMART serkin_6 107 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01806 467 Gene3D Transferase(Phosphotransferase) domain 1 187 384 - -
Pste8g01806 467 ProSiteProfiles Protein kinase domain profile. 107 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01806 467 MobiDBLite consensus disorder prediction 446 461 - -
Pste8g01806 467 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Pste8g01806 467 SUPERFAMILY Protein kinase-like (PK-like) 103 413 IPR011009 -
Pste8g01806 467 PANTHER SERINE/THREONINE-PROTEIN KINASE 91 375 - -
Pste8g01806 467 Pfam Protein kinase domain 112 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01806 467 Gene3D Phosphorylase Kinase; domain 1 110 186 - -
Pste8g01806 467 CDD STKc_CAMK 105 353 - -
Pste8g01806 467 MobiDBLite consensus disorder prediction 446 467 - -
Pste8g01806 467 FunFam Maternal embryonic leucine zipper kinase 106 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01806 Pste-Chr8 12607096 12610336 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01806 94 354 EF-hand Containing Proteins AT4G04720 44.853 4.36e-75 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pste8g01806 Pkinase 4.6e-65 CL0016