Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01796 TTTAGATACATACATGGTAAGCTAAGAAAGAAAGACTAGAGAGACACACACAGACGCCTTATATATAGAGAGAGAAACAACATACCACTTCGGTCTATACTCATTTTGTTCTTACTTCACTCCCAGATTCTCATTTCTTCTTTTCAATCATAAGAGATCTCCCTTCCCTGCAACTTCTTCTCTCTAAAAGGCTCGATCTTTAACCTCAGCGCTGCGTTTTTTGTTCTGGGGTCTCTTCCCCTTCTTCTTCTTTTTTTTTTGTTTTCCCAATAATAAATTGTCTATTTTTTTTCCTCAATCGGAGAGAGTTTTTTGCAATGGCACCCAGTTTTGATTGTGTTTCTAGCCTTCTCTGTGCGGAAGACAACAGTATTTTTGACGAAAGCGATTTTGCCGGGGAGGTGTTGGAGGACACGTGGCAGGTTGATGTATATGATCGGAACCGTAGTCAAAGTGAGAACTTTGATGTCCCAAAAGGGTGGTTTTCATTGCAGAGTGATGAGTGTTTGAGACTGATGATCGAAAAAGAATGCGATCACTTGCCTAATAGTGATTATATGAATAGGCTAAGGACTGGTGATTTGAATATTGGGGCAAGAAAAGAGGCCATTGATTGGATTGAAAAGGTTAGAGAGCACTTTGGTTTTGGACCTCTCTGTGCATATCTATCTATAAATTATTTCGACCGCTTCCTTTCTGCATATGAATTACCAAAGCATAGAGTTTGGGCAACGCAATTGTTGGCTGTGGGGTGCCTATCTCTGGCAGCCAAAATGGAAGAGACTGATTTTCCTTTGACTCTTGATTTGCAGGTGGGTGAATCTAAGTATATATTTGAAGCTAAAACAATTCAGAGAATGGAGCTTCTGATAATGAGCATATTGAGGTGGAGAATGCAGTCAACTACCCCATTTTCCTACATTGACAATTTCCTTTACAAGATCAATGATGATCAAGCTCCAATTGGAGCTTCAATTTTGCAATCCACCCAGCTTATACTGAGTATTGTAAGAGGAATTGACTTCTTAGAGTTCAGACCCTCAGAGATTGCAGCAGCAGTGGCAATATCTGTGGTGGGGGAGGGCGAAGCAGTTCACACCGAGAAAGCAATTTCTGTTCTGATTCAGCTTGTAGAAAAGGAGAGGGTCTTGAAATGTATTAAATTGATCCAAGAGCTGTCATCAAATAGTGGTTCTGCTAAGGATGCTAGTGCTTCTGCTTCTGTTTCTGTTTCTGTCCCTAGCGTGCCCGAAAGCCCAATAGGGGTGTTGAACACTGAATGCTTCAGCTACAAAAGTGATGATACTAATGCTGCTTCATGTGCAAATTCTCCACATAACAATAGTCCAGATGCTAAAAAGAGGAAGCTAAACAAAACCTTGGAAAATAGCCATTGTGGCTTGTGATTGTTAACGTCATTCCTAGGATGCTTTTCTTAAAAAAAGATGTTATGTGTTTTGAAGATGCCCCCTCAAGGGAATACCCAATCAAGGAAGACGGATAATAGATAGAG 1513 0.4052 MAPSFDCVSSLLCAEDNSIFDESDFAGEVLEDTWQVDVYDRNRSQSENFDVPKGWFSLQSDECLRLMIEKECDHLPNSDYMNRLRTGDLNIGARKEAIDWIEKVREHFGFGPLCAYLSINYFDRFLSAYELPKHRVWATQLLAVGCLSLAAKMEETDFPLTLDLQVGESKYIFEAKTIQRMELLIMSILRWRMQSTTPFSYIDNFLYKINDDQAPIGASILQSTQLILSIVRGIDFLEFRPSEIAAAVAISVVGEGEAVHTEKAISVLIQLVEKERVLKCIKLIQELSSNSGSAKDASASASVSVSVPSVPESPIGVLNTECFSYKSDDTNAASCANSPHNNSPDAKKRKLNKTLENSHCGL 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01796 362 CDD CYCLIN_AtCycD-like_rpt1 93 191 - -
Pste8g01796 362 SMART cyclin_7 99 187 IPR013763 -
Pste8g01796 362 ProSitePatterns Cyclins signature. 94 125 IPR006671 -
Pste8g01796 362 FunFam D2/4-type cyclin 77 191 - -
Pste8g01796 362 CDD CYCLIN_AtCycD-like_rpt2 196 284 - -
Pste8g01796 362 FunFam D6-type cyclin 192 282 - -
Pste8g01796 362 Gene3D - 77 194 - -
Pste8g01796 362 Gene3D - 65 281 - -
Pste8g01796 362 SUPERFAMILY Cyclin-like 55 193 IPR036915 -
Pste8g01796 362 Pfam Cyclin, N-terminal domain 63 193 IPR006671 -
Pste8g01796 362 Pfam Cyclin, C-terminal domain 197 295 IPR004367 -
Pste8g01796 362 PANTHER CYCLINS 60 289 IPR039361 -
Pste8g01796 362 SMART Cyclin_C_2 196 309 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01796 Pste-Chr8 12415318 12417794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01796 64 336 Core Cell Cycle Gene Families AT2G22490 47.273 6.22e-83 254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01796 8 12415318 12417794 Pste8g01796 8 12415318 12417794 ECH