Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01785 AAAATGTGACATGAGGAAAGCAAGATTGAAGGGGCCGGGGGAGCAGGGAAAAGGGGATCGCCCATACCCTAAAACGAAGGTTACCACCATGTTCTCCAAGCTTCATCCGCACCAACAACCTTTTCAATTCTCTAGGGAATGTCAAACATCCGAAGATGACGACAGCCCCACCACTGCCGCCCTCCACAAATCTCTTTTGCCCGCCGATGGGCCCACCATTGAAGTCGTCCGCCGCCCACGGGGCCGCCCCCCGGGCTCTAAGAACAAGCCCAAGCCCCCTTTCATTATCACGCGGGACCCCGAGCCCGCCATGAGCCCCTTCATTTTAGAACTCCCTGGCGGCAGCGACGTCGTCGACTCCCTCGCCCGCTTCAGCCGCCGCAAGAACACCGCCCTTTGCGTCCTCACCGGTTCCGGAACCGTCGCCAACGTCACTCTCCGTCAACCCTCCTTCACTCCCGCCGCCGCCCTCGCCACCGTCACCTTCCACGGCCGCTTCGATATCCTCTCCATGTCCGCCACCTTCCTCCTCCACCCACCCGCGATCCCCCCCACTTCCTTCGCCGTTTCCCTCTCCGGCCCGCAGGGGCAGATCGTCGGCGGCCTCGTTGCCGGTAGGCTCCTCGCCGCCGGGACGGTGTTCGTGATCGCCTCGTCGTTCAACAACCCCTCGTATCACCGGCTGTCGTCGTCGGACGCTCCGAACAACTCTGGCGTCGGAGAGGCGCCGTCTCCTCCTGTTTCCGGTGGTGGCGGCGCGGAGAGCGCACACGTTCCCGCTGAGTCGTGTATGTACAGCTGTCACCTTCCTTCCGATGTGATTTGGGCTCCAACTGCAAGACCGCCTTTC 850 0.6247 MRKARLKGPGEQGKGDRPYPKTKVTTMFSKLHPHQQPFQFSRECQTSEDDDSPTTAALHKSLLPADGPTIEVVRRPRGRPPGSKNKPKPPFIITRDPEPAMSPFILELPGGSDVVDSLARFSRRKNTALCVLTGSGTVANVTLRQPSFTPAAALATVTFHGRFDILSMSATFLLHPPAIPPTSFAVSLSGPQGQIVGGLVAGRLLAAGTVFVIASSFNNPSYHRLSSSDAPNNSGVGEAPSPPVSGGGGAESAHVPAESCMYSCHLPSDVIWAPTARPPF 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01785 280 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 46 237 IPR014476 GO:0003680
Pste8g01785 280 MobiDBLite consensus disorder prediction 224 239 - -
Pste8g01785 280 FunFam AT-hook motif nuclear-localized protein 102 236 - -
Pste8g01785 280 Gene3D - 102 232 - -
Pste8g01785 280 Pfam Plants and Prokaryotes Conserved (PCC) domain 103 219 IPR005175 -
Pste8g01785 280 MobiDBLite consensus disorder prediction 1 96 - -
Pste8g01785 280 CDD DUF296 103 215 IPR005175 -
Pste8g01785 280 MobiDBLite consensus disorder prediction 28 43 - -
Pste8g01785 280 ProSiteProfiles PPC domain profile profile. 98 242 IPR005175 -
Pste8g01785 280 MobiDBLite consensus disorder prediction 1 18 - -
Pste8g01785 280 SUPERFAMILY AF0104/ALDC/Ptd012-like 100 227 - -
Pste8g01785 280 MobiDBLite consensus disorder prediction 224 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01785 Pste-Chr8 12260691 12261768 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01785 65 279 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 62.882 8.42e-88 261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01785 8 12260691 12261768 Pste8g01785 8 12260691 12261768 ECH