Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01781 ATGCACAACCCCACGCGCGCCGAAGCGGAGCGTCTGCTGGGAATCGCGGAGAAGCTTCTCCAGAACCGCGATCTGATGGGTTCACGCGAGTTCGCGATCCTGGCACAGGAAACGGAGCCCCTTCTGGAGGGCTCCGACCAGATCCTGGCCATCGTGGACGTCCTACTCGCCGCCGACAAGCGCGTGAACAACCACCCCGACTGGTACGCCGTACTCCAAGTGGATCGCCGCTCCGATGACATCGACCTGATCAAGAAGCAGTACCGCCGCCTCGCCCTCCTCCTCCACCCAGACAAGTCCCGCTTCCACTTCGCCGACCACGCCTTCAAGCTCGTCGCCGACGCCTGGGCCCTTCTCTCCGACCCCGTCAAGAAGTCCGTTTACGACAAGGAGCTCTCTTTCTTCTCCCGCGTCGATTTGACCGTTCCCGGCTGGGTCCAGCAGGAGAAGCTCCCTGTTCGCAGGACTGGGCCTGGGCCTGGGCCTTGGCCCGGCCCCAGCGCCCGCAACAGCGCCTCCGCCCGCGACGAGATTCACGCCGACGAGAATTCCCGCAGGCGGAGTTCCACTTTCTGGACTGCCTGCCCTTACTGTTACCGTCTCTACGAATACCCTAAGCTTTACGAAGGTTGCTGTCTCCGCTGTCAGAATTGCGAGAGAAGCTTCCACGGCGTGGCGGTCCCGTCTCTCCCGCCGCTTGTGCCTGGTCAGGATGCTTATTACTGCTGCTGGGGATTCTTCCCCATGGGTTTTGTCATTGGCAGCTTTGGTTCGCCCGACAAAGAGACTGTTTCTGTTCCGGTGCAGTCTGCGCCACCGCCACCGCCACCGCCGCAGCCTCCTTCTCAGCATGCTTCTTCGCTGCCCAATTGGATGCCAGTGCCGGCCGCGAATGGCGCTGGAAGTGCTGCACAGGTGACGCCGGTTGCCGCCAGGGTGACGAGATCGGGGGCGGCGGTGGCGGCGGTGGCGGTTACTAATGGGGTTGGATCGGGTGCAGGGACTGGACAGAAGAAGCGGGGGAGGCCTAGGAAGTATCCATTGGCGTCCTCTGTAGTGTTTGCTATGGGGTTGATTGCATGCCTTGTCGACGAGGAGAGAACAATGTCTACGTCTGAATGGCTGATGCTTTACTGTTGGACTGTTAGAGGATATGTTCAATATATGTTTGAATTGCAGATGCTTTACTGTGGACAGTTAGAGGGTGCTCAAAGTTTGACATACCATTAG 1230 0.5984 MHNPTRAEAERLLGIAEKLLQNRDLMGSREFAILAQETEPLLEGSDQILAIVDVLLAADKRVNNHPDWYAVLQVDRRSDDIDLIKKQYRRLALLLHPDKSRFHFADHAFKLVADAWALLSDPVKKSVYDKELSFFSRVDLTVPGWVQQEKLPVRRTGPGPGPWPGPSARNSASARDEIHADENSRRRSSTFWTACPYCYRLYEYPKLYEGCCLRCQNCERSFHGVAVPSLPPLVPGQDAYYCCWGFFPMGFVIGSFGSPDKETVSVPVQSAPPPPPPPQPPSQHASSLPNWMPVPAANGAGSAAQVTPVAARVTRSGAAVAAVAVTNGVGSGAGTGQKKRGRPRKYPLASSVVFAMGLIACLVDEERTMSTSEWLMLYCWTVRGYVQYMFELQMLYCGQLEGAQSLTYH 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01781 409 SUPERFAMILY Chaperone J-domain 59 132 IPR036869 -
Pste8g01781 409 MobiDBLite consensus disorder prediction 268 284 - -
Pste8g01781 409 ProSitePatterns Nt-dnaJ domain signature. 109 128 IPR018253 -
Pste8g01781 409 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 297 - -
Pste8g01781 409 MobiDBLite consensus disorder prediction 153 181 - -
Pste8g01781 409 MobiDBLite consensus disorder prediction 262 288 - -
Pste8g01781 409 Gene3D DnaJ domain 56 139 IPR036869 -
Pste8g01781 409 SMART dnaj_3 66 124 IPR001623 -
Pste8g01781 409 ProSiteProfiles dnaJ domain profile. 67 132 IPR001623 -
Pste8g01781 409 Pfam DnaJ domain 67 129 IPR001623 -
Pste8g01781 409 PRINTS DnaJ domain signature 104 124 IPR001623 -
Pste8g01781 409 PRINTS DnaJ domain signature 69 87 IPR001623 -
Pste8g01781 409 PRINTS DnaJ domain signature 88 103 IPR001623 -
Pste8g01781 409 CDD DnaJ 67 121 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01781 Pste-Chr8 12199532 12201152 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01781 2 348 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 48.189 2.45e-104 311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01781 8 12199532 12201152 Pste8g01781 8 12199532 12201152 ECH