Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01777 CATAGATAGTGAGTGGTGAGTGAGTGGGAGAAGAGAGAAACTGTCTTCTCTTCTTCTTCGACTTCCATTAGTGCTTAACGGTTTCAATGGCGACAAACACGAGAAAGCACAGTAAGGTTCCTTGCACTGAAGAAGACACTGCTCTTCTGTTGCAAAGGTACGATACGGCGACGGTTTTGACGTTGCTCCAGGAATTGGCAAATTATCCGCATTCGAAGTTCGACTGGAATGATCTGGTGGCAAAAACCTCAACCGGAATTTCCAATGCCAGAGAGTATCAAATGCTGTGGCGTCATCTTGCTTATGGTCATTCCTTCATTGAAAATTTTGACGACACTCAACCTCTGGATGATGATAGTGACTTAGAGGGTGAACGAGAAGCATTACCCTGTGTAAACAGAGAAACTGCCTTAGAAGCTGCAGCATGTGTGCAGGTAATGATTGGATCCTTTAAACTGAGCGAATCCACCCCAACTAGCTCGGTGATTCAGGCTCCATTGGCTATAAACATTCCAGTGTGTGATTCATCTACATTTGTTAAGGAAAGTTCACACCCTTTTAATTTGAGGACACAAGAGACAAATATTATTTTTCCGGTTACTGTTAAGAGACAGCCATTGCCAAATGTATCATCAACAAGAGCTATGCCAGATATATCTTTAACCAGAGCTGTGGAAGCTACCAGACGAATTAGTGGTAACACATCCATTAAAAAGAAAAGAGAGCCATGGTCAGAGGAAGAGGATATGCAACTACGAGCTGCTGTTCAGAGGTGGGGTGAAGGTAATTGGGCAAATATCGCTAAAAGGGATGACTTTCCTATTAAGAGAAGTACCTCCCAGATGTCTAAGTTCGAGATC 860 0.4314 MATNTRKHSKVPCTEEDTALLLQRYDTATVLTLLQELANYPHSKFDWNDLVAKTSTGISNAREYQMLWRHLAYGHSFIENFDDTQPLDDDSDLEGEREALPCVNRETALEAAACVQVMIGSFKLSESTPTSSVIQAPLAINIPVCDSSTFVKESSHPFNLRTQETNIIFPVTVKRQPLPNVSSTRAMPDISLTRAVEATRRISGNTSIKKKREPWSEEEDMQLRAAVQRWGEGNWANIAKRDDFPIKRSTSQMSKFEI 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01777 258 ProSiteProfiles Myb-like domain profile. 207 252 IPR001005 -
Pste8g01777 258 Pfam Myb-like DNA-binding domain 212 241 IPR001005 -
Pste8g01777 258 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 254 - -
Pste8g01777 258 Gene3D - 205 255 - -
Pste8g01777 258 CDD SANT_TRF 214 254 - -
Pste8g01777 258 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 207 241 IPR017930 -
Pste8g01777 258 SUPERFAMILY Homeodomain-like 207 243 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01777 Pste-Chr8 12135622 12145493 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pste8g01777 Myb_DNA-binding 2e-07 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01777 8 12135622 12145493 Pste8g01777 8 12135622 12145493 ECH
Pste8g01777 8 12135622 12145493 Pste2g02518 2 25444084 25453097 PCT