Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01774 CTTTTATTCACAGTTTTCCTTTTCGGGAATTACATATACCAAATCACTCGTCACAGCATAAATTTTGTATCCTAGCATTCAATGCTCAATTTCATGCCTTCCTCTCTCTCTCTCTCTGCAATAACAATAGATCAGCAATGCTGCTACAGAGACTGAGATAAAACTGCAAATTCTTGTGTTTGAGAATCATGAGCGAACAGGAGAACAAGGGTTGTGCTTTTCTGGGAACCAACTCCGCCTATTCAGGTTTTCTTTTTGACCCTGCAAAATATGCTGTGCTGAGTTTGCCTGACAAACAGAAACTAGTTCATGAGATTGCACGACAATCAAAAGATGCCTCAAGTATGCTTCAGTCATTTACACGCAGGGAACTTCTAGAAATAATATGTGCTGAATTAGGCAAAGAGAGGAAGTACACAGGATATACCAAGAGTCAAATGATAGAACATCTTCTAAAGATAATTTCTAAGAACGCCAACTTGGACATCAATGGAAATATTCCTGCTAATTCTCCTGCCAGAAGTTGCGTTGGATTTAAAAGGAAAAAGAAACCTGCATCTCAGGATTTACATCATGCTCCTTTAGGGAACATTAAAGAGGAAATGGGGAAAACCTTTTTGTGTCAGAATGTAGCTTGCAAAGCTATGTTGAATCCAGAAGATTCTTTTTGTAAGAGATGTTCTTGTTGTATATGTCATTTTTATGATGATAACAAGGATCCTAGTTTGTGGTTGACCTGCAGCTCTGATCTTCCCAACGAGGAGTCATGTGGAATTTCCTGTCATTTGCAATGTGCTTTGAGTAATCAAATGTCTGGCATTTTGAAGGGTAGTTGTGGTATTAAGTTGGATGGAACTTTCTGTTGTGTTTCTTGTGGAAAAATTAATGAACTAATGAAGACATGGCGAAAGCAATTATTGGTGGCCAAAGAAGCAAGAAGAACAGATATACTCTCTTTGCGAATATCCCTGGCCCACAGAATTCTTATAGGAACAGAAGTCTACACGGAAGTGCAGAAGATTGTAGAAACTGCTCTCAAAGTACTAGAGAGTGAAGTGGGATCGCTTGATCATGTGTATGCTAGTATGACACGTGGAATTGTAAGCAGGCTTTCATGTGGTGCTGAGGTCCAAAGATTGTGCTCTACTGCACTTGAATGTTTTGATTCAAAGTTTTCTGATCTTTTCTCTATTAGTGTGGAAAAGAAAGATGCACCAACATGTTCAATTCGTTTTGAAGAGTGTCTTCCTACTTCGGTGGTTATTGTGCTAGAGTACAACGATAAACTTTTAAAGAACTTTTTAGGATGCAGACTTTGGCACCGAATATCAACAACAGATTACCCTGAACAACCCACCTTCATTGTCTTGAGGCCTGAGAAAAGATTCAAGTTGGAAAACCTCCATCCTTCAACTGAGTACTTTTGCAAGGCTTCTCTGTTCAGCAGCACAGGGATTTTGGGTGCTGCAGAAGCTAAATGGGTTACACCTTTTGAACCCACCAATTCTTTAAAAGTCATTAGTCACAGTGGAAATCATTTTAGATGGTCTCCTCAAAGATCCTCCGGTGCAGGAGTGGACATGTGTGCACAGGACCAAATAACTGCTGAAATTCATCCCACAGAATCTGCCAACTCTGACATGAAGTTATCATCTGGAGAACATCCTGGGAAGAAACACATTAGAAGCAGGTTTGAAGAGTTCCTCTCCAAGCCTCAACCGCTAGATCCTTTTTCATATAAAAATCCTGCTGCAGTTTCACCTCCCACACCATCTAAATCCTATGAAATGAGGCAAATTCCTGGTTTGAATTCTAGAAAGCGCTCAAAGGAAAATGATTATGAGTACTCCGTCAGGGTAGTCAAATGGTTAGAGCATCAAGGGCACATAGATGAACTCTTCAGAGTAAGGTTTCTCACTTGGTTCAGCCTCAAGGCTACTCAGCAGGAGAGAAGGGTGGTTAGTGCTTTTGTTGATGCATTGTTTGATGATCCTGCAAGCTTAGCAGACCAGCTCATACACACTTTCAGTGACGAGATATGTTGCGAGCAAAAACCTCAGTGATATTTGTTTTGGTCTGAGTCCACCAAGTTTACGTGGCACTCCAAGCTTGGATAAGAAAGTTTGTAACGCTTTGTGGAAGGTATAATCCATAAATATCAGGTTTTTCAAGTGTTCATTTGTTATCTGGGGAAGTAGTTTACAGTCTTTACACCAATTTATTTTGGATTATGTATTGGTCACTGGACTGATTGTTGGATGCAATATCACATATTCCCACGAAAGCGC 2288 0.4012 MSEQENKGCAFLGTNSAYSGFLFDPAKYAVLSLPDKQKLVHEIARQSKDASSMLQSFTRRELLEIICAELGKERKYTGYTKSQMIEHLLKIISKNANLDINGNIPANSPARSCVGFKRKKKPASQDLHHAPLGNIKEEMGKTFLCQNVACKAMLNPEDSFCKRCSCCICHFYDDNKDPSLWLTCSSDLPNEESCGISCHLQCALSNQMSGILKGSCGIKLDGTFCCVSCGKINELMKTWRKQLLVAKEARRTDILSLRISLAHRILIGTEVYTEVQKIVETALKVLESEVGSLDHVYASMTRGIVSRLSCGAEVQRLCSTALECFDSKFSDLFSISVEKKDAPTCSIRFEECLPTSVVIVLEYNDKLLKNFLGCRLWHRISTTDYPEQPTFIVLRPEKRFKLENLHPSTEYFCKASLFSSTGILGAAEAKWVTPFEPTNSLKVISHSGNHFRWSPQRSSGAGVDMCAQDQITAEIHPTESANSDMKLSSGEHPGKKHIRSRFEEFLSKPQPLDPFSYKNPAAVSPPTPSKSYEMRQIPGLNSRKRSKENDYEYSVRVVKWLEHQGHIDELFRVRFLTWFSLKATQQERRVVSAFVDALFDDPASLADQLIHTFSDEICCEQKPQ 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01774 624 CDD PHD_VIN3_plant 165 229 - -
Pste8g01774 624 PANTHER VIN3-LIKE PROTEIN 2-RELATED 21 456 IPR044514 GO:0010048|GO:0040029
Pste8g01774 624 Pfam PHD - plant homeodomain finger protein 145 264 IPR032881 -
Pste8g01774 624 MobiDBLite consensus disorder prediction 511 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01774 Pste-Chr8 12076599 12081064 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01774 23 617 PHD Gene Family AT5G57380 34.405 1.31e-103 325
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01774 8 12076599 12081064 Pste8g01774 8 12076599 12081064 ECH