Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01751 CCATCACAACAGAGAAGAGAGAGAGAAATGGAGCTCCATGACCATGATTTCTTGGAGGAATTAATGACTCTAAGAAGAGAAACATGGGATACCAATCCATGTTCACAAGAAAACCAGTTTTTCTCTAGTGGCTGGAGTTTTGATAGTTTTAATCAAAACTATCAAGCTTTTCCTCCAAATTCTTTCTTTTGCCAAGAAGTTCCTCAAAGTTACAACAACGACTACACCTACAATGAAATCTATAGTTCCTTACTTGATGAATTCTCTGCACCCCAAATTATAGATTCATCATCCTATAACACCCTTGATACTACTCCACATAATACCCCTCCATTTCTGGCTCAAGAAGATTATCCATTGTCCATGATGGAAGAAGAAGATCCGGTTTTGCTTGGGGAAGAGCTTCATTGTTTAGACCTTCAAGCTACATGTAAAATGGAGCCAAGTCCTTCCCCTGAAATGCCTGTTTTCAACACAGATTCATGTGGGGAAAGAAAGAATAGAGCAAAGAAGCTTCAGGGGCAGCCTTCAAAGAACCTAATGGCAGAGAGGAGAAGAAGAAAGAGATTAAATGACAGACTCTCCATGCTAAGATCAATTGTCCCCAAGATAAGTAAGATGGACAGAACAGCTATACTTGGAGACACTATCGATTATATGAAAGAGCTCTTGGAAAAGATTAATAATTTGAAGCAAGAAATAGAAGTGGATTCCAACATGGCTAGCATTTTCAAGGATGTAAAGCCAAATGAAATCACAGTGAAAAATTCTCCAAAGTTTGATGTGGAGAGGAGAAATGTCAACAACACAAGGGTGGAGATCTGCTGTGCAGGGAAGCCAGACTTGTTGCTGTCTACAGTAAACACCTTGGAAACGTTAGGCCTCGAGATCCAACAATGCGTTATTAGCTGTTTTAATGATTTCACAGTGCAAGCTTCTTGCTCAGAGGAATTGCAGCAGAAGACAGTTCTGAGTTCCGAGGATATAAAGCAAGCACTATTTAGAAGCGCAGGATATGGAGGACGATGTTTGTGATCTGAGAATAGAAGTGAGGTGCAAAATAGCAAAGAAAGTGTGCACTTTAGCTATAGTAGAGAGTTTTTGAGTATATGAAAGTAATATATCCATTGATTTATAAGCCAAAGCCGGATTTGTTTTTATTTTAATTAATGTATGACAATAATGGATTTCTTCAACAGGAACATGTAACACGTTCAAATAGAGATGCC 1229 0.3873 PSQQRREREMELHDHDFLEELMTLRRETWDTNPCSQENQFFSSGWSFDSFNQNYQAFPPNSFFCQEVPQSYNNDYTYNEIYSSLLDEFSAPQIIDSSSYNTLDTTPHNTPPFLAQEDYPLSMMEEEDPVLLGEELHCLDLQATCKMEPSPSPEMPVFNTDSCGERKNRAKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILGDTIDYMKELLEKINNLKQEIEVDSNMASIFKDVKPNEITVKNSPKFDVERRNVNNTRVEICCAGKPDLLLSTVNTLETLGLEIQQCVISCFNDFTVQASCSEELQQKTVLSSEDIKQALFRSAGYGGRCL 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01751 344 SMART finulus 180 229 IPR011598 GO:0046983
Pste8g01751 344 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 47 339 - -
Pste8g01751 344 Coils Coil 213 240 - -
Pste8g01751 344 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 178 236 IPR036638 GO:0046983
Pste8g01751 344 Pfam Helix-loop-helix DNA-binding domain 180 223 IPR011598 GO:0046983
Pste8g01751 344 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 174 223 IPR011598 GO:0046983
Pste8g01751 344 Gene3D - 182 256 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01751 Pste-Chr8 11721243 11723385 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01751 161 344 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 64.021 1.68e-70 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pste8g01751 HLH 1.3e-09 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01751 8 11721243 11723385 Pste8g01751 8 11721243 11723385 ECH