Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01745 TATATACTTTTCTTCTCTATTGCCTTGACCCCCAACTTGTGTTGTACGCAAATCGAGAGAAAAAGAAGAAAAAACCCAAAGCTAGCTAGAGCTTCAGCAAGCATATTCAAAATGAAAAACATGGTTTGTCCAGAAACTGAAACTGTCTCACCAAAGAAGAGAGTGATAATCAAAGAACTCCTCGTAAAGGGTCAGGAATCTGCTGCTCAACTGAAGCTTCTGCTTGAGAACCCTTTTGGGAGTGAAGCCCCTCTCTCTTCTGAGCATCTCATGGCCAATGTCCTCAGATCCTTCACACAAGCACTTTCTGTTATCAACTCTTCTTCCCAACCAGGTTCTGCAGATGAGCTGCCTCATCGGAATCTTCCATTTTCTGTCCAAAATGGGTCGCCGGCTGCTGGTTCCGCCGGTGATCTAACGTCCAGAGATTGCAGTGAGAGTAGGAGGAGATCCAAAAAGGTTGGCAGAGGTTGCTACAACAGAAGGAGGAGTGCACACTCATTGACCAAACTGTCCTGCACTACTAATGACAATCATGCATGGAGGAAGTATGGGCAAAAGGAAATCCTCAATTCTGACTTTCCTAGGAGTTACTTCAGGTGCTGTCATAAGTATGATCAAGGTTGCGGAGCAATCAAACAAGTGCAGAGGGATCAAGAGAATCCAGATATGTACCAAACTACATACATTGGCATTCACACATGCAATGCCACCCCAAAGGCTACACATTCAGTTACACATTCTGCTACTCGGGACTCTCATCTTCTGAATTCTGATCATGACACCAAGGTAACAAATGTTCAGAATTATCACATTAGCTCACCAAACTTAACTACAAAACCAGAATTTCCCAAAGAAGACACACCAAGTGATGTTACATATCACAAGCTACTAGATACTCCGGACACTGTGTATTCATGTATAGACTCTCAAAGTCTGGATATGGATTTTATGGTCCATGAAGCTGCTACTCAAGTCAAGCTTCTTCTTGAGAACCCTTTTGAGAATGAAGGCTCTCTCTCTTCTCAGCATCTCATGACCAATGTTGTCAGATCTTCTTCTTCAGAATCTGGTTCAGCAGTACATGACGTGGCTCATCATCTCAATCTCCTCAATTCTGGAGAGGACGCTACAATAGAAGGCATAATCCCTGATTTGTTGTTGCGCAGGAAGGGTGCACTGACATGGACTATACTCTCATACACCACCGATGATAATCATACATGGAGGAAGTATGGACAAAAGGGTGTCCTTAATTCTCAATTTCCTAGGTTGCCGAGCAACCAAACAGGTTCAGTTGGATCAGATTCTGCCACTTGGGAATCATATCTTCTGAATTCTGATTGTGACTTCAAGCTACCAAATGTTGAGGATCATCACCTCATTACT 1389 0.4327 YILFFSIALTPNLCCTQIERKRRKNPKLARASASIFKMKNMVCPETETVSPKKRVIIKELLVKGQESAAQLKLLLENPFGSEAPLSSEHLMANVLRSFTQALSVINSSSQPGSADELPHRNLPFSVQNGSPAAGSAGDLTSRDCSESRRRSKKVGRGCYNRRRSAHSLTKLSCTTNDNHAWRKYGQKEILNSDFPRSYFRCCHKYDQGCGAIKQVQRDQENPDMYQTTYIGIHTCNATPKATHSVTHSATRDSHLLNSDHDTKVTNVQNYHISSPNLTTKPEFPKEDTPSDVTYHKLLDTPDTVYSCIDSQSLDMDFMVHEAATQVKLLLENPFENEGSLSSQHLMTNVVRSSSSESGSAVHDVAHHLNLLNSGEDATIEGIIPDLLLRRKGALTWTILSYTTDDNHTWRKYGQKGVLNSQFPRLPSNQTGSVGSDSATWESYLLNSDCDFKLPNVEDHHLIT 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01745 463 MobiDBLite consensus disorder prediction 109 157 - -
Pste8g01745 463 Pfam WRKY DNA -binding domain 404 424 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste8g01745 463 Pfam WRKY DNA -binding domain 176 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste8g01745 463 ProSiteProfiles WRKY domain profile. 176 238 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste8g01745 463 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 402 424 IPR044810 GO:0003700
Pste8g01745 463 Gene3D WRKY domain 160 230 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste8g01745 463 Gene3D WRKY domain 391 443 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste8g01745 463 SUPERFAMILY WRKY DNA-binding domain 174 237 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste8g01745 463 SMART WRKY_cls 403 451 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste8g01745 463 SMART WRKY_cls 175 237 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste8g01745 463 SUPERFAMILY WRKY DNA-binding domain 398 424 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01745 Pste-Chr8 11567967 11579437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01745 53 241 WRKY Transcription Factor Family AT3G56400 41.237 2.24e-36 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste8g01745 WRKY 1.2e-22 CL0274