Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01737 TGCAACAAGGGCGTGAAAGAGAATGTGCATTCTTAATTAGCACAGTGTTGAAAGTGTTGATGGATGTTGCCTTTTGGGTTCATTTATCCATAAACGAACTACCAGTCAAAACTGACAACCTGATCTTCATGAATTTGATAAGTGTTGCTACATCCACTGTTTCCTGTAAAGCGGGAAGCAATAAGTATAACAACTTCCTTTTCTGGATTTTGGTTTGCTTCTTGCTCCCTAGTTTTCTGGGAGATCCTGAAGTATATGCTCGCTTCCAATTAATAAAGTTCATTGTTGGGTTTTCATCTTCCTCCATTTGGGTTCTGCCAAGGCACACCTATATTTCTGAAGATTCTTTGTTGTTTTCTGCGGTCTTCTTGTTTTTCAAAGAACCATGGTTTCCTCTCAGTTCAAAGAAGCCTTTCCTAAACCAGTTGCTTCTACCAAATGGGCCACCTGATCAACTGCCCTCTTCTGATCGTGTGGATTTTGAATTTTCTGATGTGTTTGATCCGTTTCCTATTGAAGCCTCAATAGCAGTAAGCTCTGAGAAACGTGGAAATTCGGTAGCCACACAAGGTTCAAGTGAAAAGATTTACAATGACCCTGCTTGCGTTCACAACCACTCTCAATCTTTTTTGGCTCCAACAACCTGTATTGGTCAATCCTTGCAGCTTAGCAAGCTCACCTTACATGAGACAGATGATGCATTGGATCTTCTGGAGAAAAATGCTGTAGTAGAGAAAAATGATTTACATTTCAATAATTATTGTCTGAATAATCAGACTATTGGAGTGGAGGATTTTGAAGTTTTGAAGGTTGTTGGGCAAGGTGCTTTTGGTAAAGTGTATCAGGTGAGGAGGGCAGGCACTTGTGAAATATATGTAAAATCTGAAAGGGATATATTAACAAAGGTGGACAACCCATTTGTTGTGCGGCTCAGATATCCATTCCAAACCAAATATAGGCTGTACCTTGTGCTTGATTTTGTTAATGGTGGCCACCTTTTCTTTCAGCTCTATCACCAGGGCCTATTCAGGGAAGATTTGGCACGCTTCTATGCTGCAGAGATTATTTGTGCAGTTTCTTATCTTCATGCAAATGATATAATGCACAGGGATCTTAAGCCTGAAAATATTCTTCTTGATGCTGACGGTCATGCAGTGTTAACAGATTTTGGCCTTGCTAAGCAATTCAATGAGAATGAAAGGTCCAATTCTATGTGTGGAACTGTAGAGTACATGGCCCCTGAAATTGTTATGGGGAAAGGCCACGATACGGCAGCTGATTGGTGGAGTCCTCCTTTCTTTGGTGGAAATAAACATAAGACACAGCAGAAGATAATTAAAGACAAAGTCAAGCTCCCAGCCTTTTTATCAAATGAGGCACATTCACTGTTGAAAGGGCTGTTGCAGAAAGATGTTACCAAACGCCTTGGCAGTGGATCAAGAGGCAGTGAGGTGATTAAAAGCCACAAGTGGTTTAAATCAGTCAATTGGAAGAAACTGGAAGCCCGAGAAATTAGGCCAAGCTTTGTCCCAAAGGTTGCTGGAAAGCACTGTGTTACTAACTTTGAAGACAGGTGGACTAGTATGCCCTTGATGGATTCTCCAGCAGCTAGTCCCAAAAAAGATGACAATATCTTCAAGAAGTTCTCATATACTGATAGAAATGCC 1667 0.4085 MDVAFWVHLSINELPVKTDNLIFMNLISVATSTVSCKAGSNKYNNFLFWILVCFLLPSFLGDPEVYARFQLIKFIVGFSSSSIWVLPRHTYISEDSLLFSAVFLFFKEPWFPLSSKKPFLNQLLLPNGPPDQLPSSDRVDFEFSDVFDPFPIEASIAVSSEKRGNSVATQGSSEKIYNDPACVHNHSQSFLAPTTCIGQSLQLSKLTLHETDDALDLLEKNAVVEKNDLHFNNYCLNNQTIGVEDFEVLKVVGQGAFGKVYQVRRAGTCEIYVKSERDILTKVDNPFVVRLRYPFQTKYRLYLVLDFVNGGHLFFQLYHQGLFREDLARFYAAEIICAVSYLHANDIMHRDLKPENILLDADGHAVLTDFGLAKQFNENERSNSMCGTVEYMAPEIVMGKGHDTAADWWSPPFFGGNKHKTQQKIIKDKVKLPAFLSNEAHSLLKGLLQKDVTKRLGSGSRGSEVIKSHKWFKSVNWKKLEAREIRPSFVPKVAGKHCVTNFEDRWTSMPLMDSPAASPKKDDNIFKKFSYTDRNA 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01737 536 SMART pkinase_C_6 473 533 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pste8g01737 536 Pfam Protein kinase domain 246 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01737 536 SMART serkin_6 246 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01737 536 CDD STKc_AGC 252 472 IPR045270 GO:0004674|GO:0005524
Pste8g01737 536 ProSitePatterns Serine/Threonine protein kinases active-site signature. 347 359 IPR008271 GO:0004672|GO:0006468
Pste8g01737 536 ProSiteProfiles Protein kinase domain profile. 246 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01737 536 FunFam Non-specific serine/threonine protein kinase 308 491 - -
Pste8g01737 536 Gene3D Phosphorylase Kinase; domain 1 194 271 - -
Pste8g01737 536 Gene3D Phosphorylase Kinase; domain 1 273 515 - -
Pste8g01737 536 SUPERFAMILY Protein kinase-like (PK-like) 243 518 IPR011009 -
Pste8g01737 536 ProSiteProfiles AGC-kinase C-terminal domain profile. 473 536 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pste8g01737 536 PANTHER RIBOSOMAL PROTEIN S6 KINASE 213 532 - -
Pste8g01737 536 Gene3D Transferase(Phosphotransferase) domain 1 308 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01737 Pste-Chr8 11431754 11441980 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01737 117 532 AGC Kinase Gene Family AT3G08720 55.240 2.33e-174 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Pste8g01737 Pkinase 1.1e-47 CL0016