Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01736 TTCAAAGCAGAGCCAAGCTAGGATGAAGAACAGCTAAGGTCAGAACTTGGAAATACCATTTGCCACCATTTCACACCAAACAAGCACCAATGAAGTTCCAATTTCTAGCTGTTTCATTTGTTCTTCTGAACATTATACTATCTCTCTTTGGCTTGATTGAAGCTGATTTGAACTCTGACAGACAAGCTCTTCTAGAGTTCTTTACCAATGTTCCACATGCCCCAAGGTTAAACTGGAGTGAGTCTACTCCAATGTGCACAGCATGGGCTGGTGTGACTTGCAATCAAAATGGTACCAGTGTCATTGGCATCCATCTTCCAGGGGCTGGATTCAAGGGCTCCATTCCAGAGAACAGCCTAGGAAAACTAGATGCTCTTAAATTCTTGAGTCTTCACTCCAATGGCCTTAAAGGAAACCTTCCTTCTGACATCCTATCTATTCCTTCACTCCAATATGTAAACCTGCAGCAGAATAACTTCTCAGGACCAATCCCTTCCTCTATCTCCCCTAAACTAACAGCATTGGATATTTCCTTTAACAACTTTTCTGGCAGTATCCCACCCACCTTTCAGAATCTTAGTAGACTCACCTGGTTGTATCTCCAAAACAATTCCCTCTCTGGGGCTATCCCTGACTTCAACCTTCCCAGTCTCAAGTATTTGAATTTGAGTTATAACAATTTGAATGGCTCAATTCCAAATTTTATCAACCATTTCCCTTACACTTCTTTTCTTGGGAACTCTCTCTTGTGTGGATCACCTCTCAAAAATTGTTCTATAGCCTCCATTCCATCTTCTTCTTCCTCTCTTTCTCCTTCTCCTTCTCCTGTTTATCAACCACCCTCTCCAGCATCAACTCCCAAAAATAGAAGTGCAACCACTTCGAAGAGTTACTTTGGCCTTGCTATTATACTTGCTCTAGCAATTGGGGGCTGTGCCTTTCTCTCTCTCTTAGTTTTGATCATCTTTGTATGTTGTTTGAAGAAGAAAGAGAGTCAAAGCAGTGGCATATTGACAGGAAAGGCACCTTGTGCTGGAAAGGCTGAGATTTCAAAGAGTTTTGGGAGTGGGGTGCTAGAGGCAGAAAGGAACAAATTGTTCTTCTTTGTAGGGTGCTCTTATAGCTTTGACCTTGAAGATTTATTAAAGGCTTCAGCTGAAGTTCTTGGAAAGGGGAGCTATGGAACAACATATAAGGCTGCTTTGGAGGATGGAACAACAGTGGTAGTTAAAAGGTTGAGGGAAGTTCTGGTTGGAAAGAAGGAGTTTGGGCAGCAAATGGAGACCGTAGGAAGAATTGGAAGGCACCCCAATGTCATGCCCCTTCGGGCTTATTACTATTCCAAAGATGAGAAACTTCTAATTTATGACTACACGCCAGGAGGCAGCTTGTTTTCCTTGTTGCATGGAAACAGAGGCATGGGAAGAATTCCATTAGACTGGGATTCAAGAATGAAGATTGCACTAGGAGCTGCAAAGGGAATTGCTTCCATTCACACTGATCACATGGATTCAAAACTTACTCATGGCAACATCAAGTCCTCCAATGTGCTCATAACCCAAGAACATGATGGCTGCATCACTGATGTTGGGCTTACTCCTATGATGAGCATCCAATCAACCATGTCAAGAACCAATGGGTACCGTGCTCCCGAAGTAACTGAGTGCCGGAGGATCACTCAGAAGTCTGATGTTTACAGCTTTGGGGTGGTCCTTCTTGAACTGCTAACTGGCAAGGCCCCACTGGGATATCCTGGTTATGAGGACATGGTTGATCTTCCAAGGTGGGTGAGGTCTGTTGTTCGTGAGGAATGGACAGCTGAAGTTTTTGATGAGGAACTTCTTAAAGGGCAATATTTTGAAGAGGAGATGGTGCAGATGCTTCAGATTGCACTGGCTTGTGTGGCAAAGATTGCAGATAATAGGCCAACAATGGATGAAACTGTTAGGAACATAGAGGAAATTAGACTTCCTGAATTGAAGAATCGTAACACATCATCTGAGTCTGAATCTAATGTACACACTCCATGATTATTTGTGCATGTATACTTGCCCTGCCATGTACTGGTTATGTTCTGCGATACACAAGGAATAACCTTGTGTCTCTAGAGTATTCAAGTTATTATTATTGCGTTGTATCATTGTATGTTCAGATGACAGTAGTTTCTTATGTCA 2174 0.4259 MKFQFLAVSFVLLNIILSLFGLIEADLNSDRQALLEFFTNVPHAPRLNWSESTPMCTAWAGVTCNQNGTSVIGIHLPGAGFKGSIPENSLGKLDALKFLSLHSNGLKGNLPSDILSIPSLQYVNLQQNNFSGPIPSSISPKLTALDISFNNFSGSIPPTFQNLSRLTWLYLQNNSLSGAIPDFNLPSLKYLNLSYNNLNGSIPNFINHFPYTSFLGNSLLCGSPLKNCSIASIPSSSSSLSPSPSPVYQPPSPASTPKNRSATTSKSYFGLAIILALAIGGCAFLSLLVLIIFVCCLKKKESQSSGILTGKAPCAGKAEISKSFGSGVLEAERNKLFFFVGCSYSFDLEDLLKASAEVLGKGSYGTTYKAALEDGTTVVVKRLREVLVGKKEFGQQMETVGRIGRHPNVMPLRAYYYSKDEKLLIYDYTPGGSLFSLLHGNRGMGRIPLDWDSRMKIALGAAKGIASIHTDHMDSKLTHGNIKSSNVLITQEHDGCITDVGLTPMMSIQSTMSRTNGYRAPEVTECRRITQKSDVYSFGVVLLELLTGKAPLGYPGYEDMVDLPRWVRSVVREEWTAEVFDEELLKGQYFEEEMVQMLQIALACVAKIADNRPTMDETVRNIEEIRLPELKNRNTSSESESNVHTP 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01736 646 MobiDBLite consensus disorder prediction 235 259 - -
Pste8g01736 646 SUPERFAMILY Protein kinase-like (PK-like) 357 621 IPR011009 -
Pste8g01736 646 Gene3D Phosphorylase Kinase; domain 1 323 428 - -
Pste8g01736 646 FunFam Leucine-rich repeat receptor-like protein kinase 142 228 - -
Pste8g01736 646 PANTHER OS05G0588300 PROTEIN 11 638 - -
Pste8g01736 646 Pfam Leucine rich repeat 140 198 IPR001611 GO:0005515
Pste8g01736 646 ProSitePatterns Protein kinases ATP-binding region signature. 359 390 IPR017441 GO:0005524
Pste8g01736 646 FunFam pollen receptor-like kinase 1 321 428 - -
Pste8g01736 646 FunFam Leucine-rich repeat receptor-like kinase 30 141 - -
Pste8g01736 646 Gene3D Transferase(Phosphotransferase) domain 1 430 644 - -
Pste8g01736 646 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 429 636 - -
Pste8g01736 646 SUPERFAMILY L domain-like 39 225 - -
Pste8g01736 646 Gene3D Ribonuclease Inhibitor 141 230 IPR032675 -
Pste8g01736 646 Gene3D Ribonuclease Inhibitor 29 140 IPR032675 -
Pste8g01736 646 ProSiteProfiles Leucine-rich repeat profile. 187 209 IPR001611 GO:0005515
Pste8g01736 646 Pfam Protein kinase domain 357 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01736 646 ProSiteProfiles Protein kinase domain profile. 353 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01736 646 Pfam Leucine rich repeat N-terminal domain 28 65 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01736 Pste-Chr8 11424218 11426938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01736 8 641 Receptor kinase-like Gene Family AT5G58300 57.256 0.0 694
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pste8g01736 Pkinase 9.9e-31 CL0016