Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01720 ATGATTGGAATTTCCTTCATTCTCTTGAATGCTATGGCTTCTTTATCCAATATCTTGCTCGTGTTTTGTTTGTTTAATCTTCTGGCATACCCAGTTGCAGTTCATTCAGCCGGTGATATTCCAATTAATGTGACCAAGCACTTTTCCTTCTATAATTTCAGTTTCAGCAACAACCCCAGATTAGTTCATGATGTGAAGCTCCTAGGCAGTGCTAAGTTCTCAAATGAAAAGGGGGCTCTTCAAATCCCCGATGAATCACAAGAAACTGACATAAGGCACCAAGCTGGTAGAGGCATCTATTCCTTCCCAATTCGCCTTCTAGATCCAAGTACCAAGACCCCAGCTTCCTTTCAAACCACTTTCTCATTTCAAATGGATAATTCCACTGTCTCTGAGCAAGCTGCTTATGGAGGTAGTGGTCTCACTTTCATCATTGTCCCTGATGAGTTCACTGTGGGAAGGTCAGGACCATGGCTTGGCATGCTCAATGATGCTTGTGAGAATGACTACAAGGCTGTGGCAGTGGAGTTTGACACAAGAAAGAACCCAGAGTTTGGAGATCCAAATGACAACCATGTTGGCATCAATTTAGGTAGCATAGTATCTACTAAAGTTATCAATGTTTCTGATGTAGGAGTGTCTCTTAAGGATGGTTTTGTTCATCGTGCTTGGATCACTTATGATGGTCCTCAAAGGAGAATGGATATTAGTCTTGGAAGGGCCAACGAAGAAGATTATCCTTCCAAGCCTATCTTCTCAGAATCTGTGGATCTCTCTCCTTATCTAAATGAGTACATGTTTGTGGGGTTCTCAGCTGCCACAGGTAACCATACCCAAATCCACAACATACTCTCTTGGAACTTCACTTCCACAAGCCAAGCTTTTCTTCGCTTGCCTTCGTCTGAAACCTGCCAGGGTAAGATCTTACTTGAGAATAGCACAGCAGCACCAACTCCCCAGAGGTCTTCTAAGAAGGAGCCACCACGAAGCTTTTTGATTTTTATGGTTGCCGTGGCATTGGCTTTGCTTCTTTTCCTTGGTTTTTACTTCATCAGTAAGCACAAGAGAAAGGCTTCCAAGTTAAACACTTCAGTGGAGACAGAGATTCACATGCCTAGGCCTCCAAACAAACCGCGCCGCTTCACCTTTTCTCAACTTTCATCTTCGACTCGATCATTCAATGAGATAGAGTTGCTTGGCAGTGATTCTAGAGGAGAATACTACAGAGGAAAGCTTTCCAATGGCAGTCAGGTGGCTGTGAAAAGGTTCTCAACTCAGTTTCTCAACACACATGGATCAGACAAGAAGCGTTTGTTGAAAGAAATCAAAAGCATTAGCCATCTTCGCCACCCGAATTTGCTTCCTGTTAGAGGGTGGTGTCAAGACAATCATGAAATCATGGTGGTCTATGATTTTGTCCCCAATGGCAGCCTAGATAAATGGCTGTTTGGGGCTGGAGTTCTTCCATGGACTCGGCGACTTAAAGTTATTAAGGATGTAGCTGATGGCCTGAGCTTCATCCACACTAAGCAACTAGCCCACAAGAACTTGAAATGCAGTAGTGTGTTTCTAGATGTCAATTTTAGAGCTGTTTTGGGTGATTTTGGGTTTGTGTTGATGGGTGCAGAATCAAAACAGTTTGAGTCAGCAGTGTGCCAAGGTGCAGATGTATTTGAGTTTGGTGTCCTTGTGCTGGAAGTGATAGCCGGAAGAGTAAGAGATGAGAAAGAGGAGGGAAATCCAGAAGAGAGGAACCTATTGGATTATGCTTGGAACTTGCATCAGACTGATGAGAAAGTGAAGCTGGTGGACGGAAGGATGGGATCATTGATCAACTTGGAGCAGGCAATTCGTGCTATTGAAATTGGGTTGCTTTGCACTCTAAATGAGAACAAAGGAAGGCCCTCAATGGACCAAGTGGTGGAGTTTCTTCTCAACATGGATAAGCCCATTCCTGAGCTGCCAAAAACTCGCCCTGTTGCCTTGTTCCCTTATAATAGCGCCAACACAGGACTTTGCAATGCATATTCTTGCACTTTTTAG 2043 0.4376 MIGISFILLNAMASLSNILLVFCLFNLLAYPVAVHSAGDIPINVTKHFSFYNFSFSNNPRLVHDVKLLGSAKFSNEKGALQIPDESQETDIRHQAGRGIYSFPIRLLDPSTKTPASFQTTFSFQMDNSTVSEQAAYGGSGLTFIIVPDEFTVGRSGPWLGMLNDACENDYKAVAVEFDTRKNPEFGDPNDNHVGINLGSIVSTKVINVSDVGVSLKDGFVHRAWITYDGPQRRMDISLGRANEEDYPSKPIFSESVDLSPYLNEYMFVGFSAATGNHTQIHNILSWNFTSTSQAFLRLPSSETCQGKILLENSTAAPTPQRSSKKEPPRSFLIFMVAVALALLLFLGFYFISKHKRKASKLNTSVETEIHMPRPPNKPRRFTFSQLSSSTRSFNEIELLGSDSRGEYYRGKLSNGSQVAVKRFSTQFLNTHGSDKKRLLKEIKSISHLRHPNLLPVRGWCQDNHEIMVVYDFVPNGSLDKWLFGAGVLPWTRRLKVIKDVADGLSFIHTKQLAHKNLKCSSVFLDVNFRAVLGDFGFVLMGAESKQFESAVCQGADVFEFGVLVLEVIAGRVRDEKEEGNPEERNLLDYAWNLHQTDEKVKLVDGRMGSLINLEQAIRAIEIGLLCTLNENKGRPSMDQVVEFLLNMDKPIPELPKTRPVALFPYNSANTGLCNAYSCTF 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01720 680 ProSitePatterns Legume lectins beta-chain signature. 173 179 IPR019825 -
Pste8g01720 680 Pfam Legume lectin domain 47 294 IPR001220 GO:0030246
Pste8g01720 680 Gene3D Transferase(Phosphotransferase) domain 1 473 653 - -
Pste8g01720 680 Gene3D Phosphorylase Kinase; domain 1 351 472 - -
Pste8g01720 680 ProSiteProfiles Protein kinase domain profile. 393 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01720 680 SUPERFAMILY Protein kinase-like (PK-like) 369 644 IPR011009 -
Pste8g01720 680 Gene3D - 45 298 - -
Pste8g01720 680 FunFam Putative L-type lectin-domain containing receptor kinase S.7 isoform A 45 298 - -
Pste8g01720 680 FunFam Putative L-type lectin-domain containing receptor kinase S.7 isoform A 355 472 - -
Pste8g01720 680 Pfam Protein tyrosine and serine/threonine kinase 397 538 IPR001245 GO:0004672|GO:0006468
Pste8g01720 680 PANTHER - 84 645 - -
Pste8g01720 680 CDD lectin_legume_LecRK_Arcelin_ConA 47 291 IPR001220 GO:0030246
Pste8g01720 680 FunFam Lectin-domain containing receptor kinase A4.2 473 652 - -
Pste8g01720 680 SUPERFAMILY Concanavalin A-like lectins/glucanases 49 292 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01720 Pste-Chr8 11242768 11244810 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01720 14 663 Receptor kinase-like Gene Family AT5G55830 32.029 1.06e-95 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pste8g01720 Lectin_legB 8.3e-59 CL0004