Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01710 GGGTTAGGAAGAAGAAAGGGTTGGCTTTGGCCCCAACACACGCTGTGACTGTGATGCGAGAAATGGGAGAGGGAGAGAACATAGAATTAGAAACAGAAACAGAAACAGAATCCGAATCAACATCCACATGGAACCTCGGACAGCACACTCAGATAATTGAGCTTTCGGAGAAGCTCACGAATGGAAACCTCAACGCCAAGATTGAGGTTGCGAGGGAGATAAGGAAGATGGTTCGGAAATCATCGTCATCCTCGAAGACACGTGCCAAGTTCGCCGCAGCGGGTGTGATTGAACCACTCGTGTTGATGCTGTCTTCCTCCAACATCGACGCTCGCCAATCCTCTCTCCTCGCTCTTCTCAACCTCGCTGTTCGCAATGAGCGAAACAAGGTCAAAATAGTGACAGCTGGTGCCATGCCTCCACTGGTGGAGCTCCTCAAGATACAAAATTGCGGTATGCGAGAATTAGCTACCGCTGCAATCTTGACACTCTCAGCTGCTGCATCCAATAAGCCCATTATTGCTGCTTCTGGAGCCGCACCTCTCCTTGTTCAGATTCTCAAATCTGGAAGTGTTCAAGGCAAAGTTGATGCTGTTACAGCCCTCCATAACCTTTCTACTAGCATTGAGAATTCCATTGAACTTCTTGATGCAAGTGCTGTTTTCCCTCTGATCAACCTTCTTAAAGAGTGCAAGAAGTATTCCAAGTTTGCAGAAAAAGCCACAACACTGCTTGAAATCCTTTCCAACTCTGAAGAAGGACGAACAGCAATCACAATTGCAGATGGTGGAATCTTAACTCTTGTAGAGACAGTTGAAGATGGATCACTAGTCAGCACAGAACATGCTGTTGGAACTCTGTTATCATTATGTCGAAGCTGCCGGGATAAATACCGGGAACTGATTCTTAAAGAAGGAGCAATTCCGGGTCTGTTACGTCTGACAGTGGAGGGCACAGCTGAAGCTCAAGATAGAGCACGTCTGCTTCTGGAATTGCTCAGAGATTCTCCCCCAGAAAAAAGACTAACTTCATCAGTTTTGGAGAAAATTGTTTATGACATTGCTGAACGGGTAGATGGAGCAGATAAAGCTGCTGAAACTGCCAAACGGTTATTGCAAGATATGGTTCAAAGGAGTATGGAACACAGCATGAAATGCATCCAGCATAGGGCTGCATCTTGTACTCCTTCTATTCCATCCACTTGATGCGTACCTTTTTTTCCTCATCAAGCAACTGCAAAATTGAGATTTAACTTGTATATATGTGTTTTTATTTTATTTTTTTCTCTGGGGGGGCAGTTAGTGTGTTAACTAGATCACCATGCAAAGCGAGTCTTAGCTGCTCTTAGTGTAATGATGTTTACCAGACTAACTTGGCATTCATCTGTTGACTTCACTCATAATTAATTACACCGCATACTTCCTTCAGA 1429 0.4458 MREMGEGENIELETETETESESTSTWNLGQHTQIIELSEKLTNGNLNAKIEVAREIRKMVRKSSSSSKTRAKFAAAGVIEPLVLMLSSSNIDARQSSLLALLNLAVRNERNKVKIVTAGAMPPLVELLKIQNCGMRELATAAILTLSAAASNKPIIAASGAAPLLVQILKSGSVQGKVDAVTALHNLSTSIENSIELLDASAVFPLINLLKECKKYSKFAEKATTLLEILSNSEEGRTAITIADGGILTLVETVEDGSLVSTEHAVGTLLSLCRSCRDKYRELILKEGAIPGLLRLTVEGTAEAQDRARLLLELLRDSPPEKRLTSSVLEKIVYDIAERVDGADKAAETAKRLLQDMVQRSMEHSMKCIQHRAASCTPSIPST 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01710 383 FunFam U-box domain-containing protein 4 9 375 - -
Pste8g01710 383 MobiDBLite consensus disorder prediction 1 26 - -
Pste8g01710 383 Gene3D - 23 377 IPR011989 -
Pste8g01710 383 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 201 245 IPR000225 GO:0005515
Pste8g01710 383 Pfam Armadillo/beta-catenin-like repeat 108 147 IPR000225 GO:0005515
Pste8g01710 383 Pfam Armadillo/beta-catenin-like repeat 152 188 IPR000225 GO:0005515
Pste8g01710 383 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 160 202 IPR000225 GO:0005515
Pste8g01710 383 PANTHER U BOX DOMAIN-CONTAINING 33 317 - -
Pste8g01710 383 SUPERFAMILY ARM repeat 37 328 IPR016024 -
Pste8g01710 383 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 77 119 IPR000225 GO:0005515
Pste8g01710 383 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 119 161 IPR000225 GO:0005515
Pste8g01710 383 SMART arm_5 66 106 IPR000225 GO:0005515
Pste8g01710 383 SMART arm_5 149 189 IPR000225 GO:0005515
Pste8g01710 383 SMART arm_5 190 232 IPR000225 GO:0005515
Pste8g01710 383 SMART arm_5 233 274 IPR000225 GO:0005515
Pste8g01710 383 SMART arm_5 107 148 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01710 Pste-Chr8 11054636 11060154 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01710 3 317 U-box Gene Family AT3G54790 35.276 5.12e-38 143