Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01707 GACTCTCAGCATTGATCAAAATGGGCCTCTCAAGTCTTCCAGCACCATCTGAAGGAGTATTATGTGTCCTTTTGGTGAACACTGTATTGTCAATTTCCATATTTAAAGGCATTGTTAGAACAATCCTACACATTGTTGGTATCCATCTTTCATCATCCTCCACTACACCCTCTTCACCAGATCCCTCCCAAACCCCACCTGAGTCATTTGAATTCCATCTCAGTCCTGCTGAGAGTTACATTGAAGAGTTTAGAAGCCGGACACCAACACTTCGGTTTGATAGTGTGTGTTGCTGTAAACGACCTGAACATGACTGCTCTGTATGTCTCACTCAGTTTGAACCGGATTCAGAGATAAACCGCCTATCTTGCGGCCATCTCTTCCATAAAGTGTGCTTGGAGAAGTGGCTGGACTACTGGAACATTACATGCCCACTTTGCAGGACCCCTTTGATGCCTGAAGATGATGCACCTTGCTTTCACAAAATGAGTGAGTATGGCAATAAGAGAGAGTTTCATGTACAGTGTAGTGTACATATTCTTGAGGGTTTTGATGCTCATGCATCTCAGTTCTGCCACCTTTTT 584 0.4384 MGLSSLPAPSEGVLCVLLVNTVLSISIFKGIVRTILHIVGIHLSSSSTTPSSPDPSQTPPESFEFHLSPAESYIEEFRSRTPTLRFDSVCCCKRPEHDCSVCLTQFEPDSEINRLSCGHLFHKVCLEKWLDYWNITCPLCRTPLMPEDDAPCFHKMSEYGNKREFHVQCSVHILEGFDAHASQFCHLF 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01707 188 SMART ring_2 99 140 IPR001841 -
Pste8g01707 188 SUPERFAMILY RING/U-box 95 147 - -
Pste8g01707 188 PANTHER - 1 149 IPR044249 -
Pste8g01707 188 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 97 150 IPR013083 -
Pste8g01707 188 ProSiteProfiles Zinc finger RING-type profile. 99 141 IPR001841 -
Pste8g01707 188 Pfam Ring finger domain 98 141 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01707 Pste-Chr8 11021234 11021822 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01707 1 148 C3H Transcription Factor Family AT2G04240 66.234 9.49e-61 184