Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01706 ACCCACACCCACACCCACACCCACACCCACACCCACCTACACCATCCCTCCCCATCATATCTAATCTAAAATCTACCTATTCCTATCTATCTGAACAGAGCAGAGGAGAGAGAGCAACACAAAAAGGCTCTGTGTTTGTTCTCTTCAAAAGTCCAGCTTCCACCTCTAGGGTTCCTTTGCTTCCAATTTATGCATAAAAATATTATTTTTATATTATTTTTCTGAAAAAAGCAACACCCCTTTTCCTTACCGATCTTGTCCTCTCTGTCTTTCTTGCCGTATGTTCATGTTTTTTCCGGCGTGAAGACTTTTCTGGGAGATTCAGATAAGGAAAAGTTGAGAATTTTGATACACAGCTGCTGAGTTTGCAGAACTGAATTGTAGCTTCCTTCATCACATTGTTCAACCGCTTGTAAGTTCTAATAAGAACTCGGTTCAGTTTTAACAGCTTGATAAGAAGGAACTTCTGTTGAAGTTTGTGTACATATAATTAATCAGTTGGAATTGTTCATTTAGATTCAGGAGCAAGCGAAGAGGTGATTTAAAGATGGGTTACTTATGTGATTTTTGTGGAGATCAGAGGTCCTTGGTTTACTGCCGCTCTGATGCTGCATGCTTATGTTTGTCATGTGACCGAAATGTTCATTCTGCTAATGCCCTTTCTAGGCGTCATTCGAGAACACTTGTATGTGAGAGATGTAATTCACAACCTGCATTTGTGAGGTGTGTTGAAGAGAAAATTTCACTTTGTCAGAACTGTGATTGGTTGGGTCATGGTACCTCACCCTCTTCTTCCACACACAAGAGGCAAACAATTAATTGCTTCTCGGGCTGCCCTTCAGCTGCAGAGTTTTCTTCAATATGGTCATTTTTCTTAGATATCCCTTCTATGGGTGAAGCATGTGAGCAGGAACTAGGTTTGATGAGCATTAATGAGAACAGCAACAAAAGCGCTTGGGTTCCTCCAGAAGGGCAGAACATGTCTGGTTCAGCTCAAGTGGCTGAGCTACCCAGCAAGGGTAAATCTTGGGCTGGCACATCTTCAATACCTGAGTCAAGCTCAGAACCTTGTATTCTTGACCAGCCACCTCGACCTGCCAATGAATCTATGCCCAAGTTGTACTGTCCTGGGAAGAAAGTTTCTGGAGTATGTGAAGATGACGATCTATATGATGATTTCATCATGGATGAAGTGGATCTAGAACTTGAGAACTATGAGGAACTTTTTGGGATGGCTCTCAGTCACTCTGAAGAGCTATTTGAAAATGGTGGAATTGATAGCTTATTTGAGACAAAGGACATGTCTGCTAGTGCTGGTGATTCCCAATGTCAGGGTGCTGTTGCTGCTGAGGGATCGTTTGCTGGGTTGGTCAATGCTATCCAACCTGTATGCAGCAAGGCAGCATCTGCAGATTCAATATTGAGTACAAAAACTGAACCAATTGCTTGTTTGACGGCAAAGCAATCTCAATCGAACATTTCTTTTTCTGGCATTACTGTTACCAAAGATAGTGCTGGTGACTATCAAGACTGTGGTGCTTCTTCAATGCTTCTTATGGGAGAGCCTCCCTGGTGTCCTCCTTGCCCTGAGAGTTCTCTGCATTCTGCTAACCGCAGCAATGCTGTCATGCGCTATAAGGAAAAGAAGAAGACCCGGAAGTTTGAGAAGAAAGTAAGGTATGCCTCTCGCAAGGCTAGGGCTGATGTCAGAAGGCGTGTGAAGGGCCGATTTGTTAAAGCCGGTGATGTCTATGACTATGACCCTTTGAACCAAACCAGAAGCTGCTGAGTGTACAACTTTTAACCATGTTCTATAAAAGGAAAGAAACACTCATATAGTTGCAAAAGAAAACAGTAATTACCTGAAAAAATGGATGAAATTTGATGCATTCTTTCTGCATGCAATGACAAGCTATCTGATTTTTATCACAGGGGCATACATTTTCTTCAAGGGGAAGAAGGTTGTAAGCAGGCCCTATTCCAATGAATTGAAAGTATAAGCTAAGGAGCAGATTGTATGTCCTTCACTGCAATGGATATCCCAGTTGCAATTTCAGCTGACATGACAGCATCACAAACTGCCCCTTCAGGCAATGTGTCATGAATTTTGATTGCCTTTCTGTTTAACTGGGGAAATCCTGCTTCTTAATTCTAATCTAATGCAAAATTATTTTTAAGTCCTCTGGCCTTGATCCTGGAAATAGTTTGTCATATTTTAAGTCAACTCCTCACTGATCCTAAGTCACATGTACAAGTGCCTATGATGGCATGATAAGTGACTCAATTTTATAATTCTAGACAATCTTCTACACTTTTGTAGGCTGTAATATTTTGTCCCTCTCTCTTTGCCTTGTATAGTGCTGAATATACATATATGCAAGTAGAGATGGTCCAACAGTTCCTTAGGTATGACAAATTGTAAATTCGAAGGTTATTTATTTATGTATAGAATAGGATACTGCTATTTATTTATGTTGATGACACAAATTCTATATTGGAC 2500 0.4088 MGYLCDFCGDQRSLVYCRSDAACLCLSCDRNVHSANALSRRHSRTLVCERCNSQPAFVRCVEEKISLCQNCDWLGHGTSPSSSTHKRQTINCFSGCPSAAEFSSIWSFFLDIPSMGEACEQELGLMSINENSNKSAWVPPEGQNMSGSAQVAELPSKGKSWAGTSSIPESSSEPCILDQPPRPANESMPKLYCPGKKVSGVCEDDDLYDDFIMDEVDLELENYEELFGMALSHSEELFENGGIDSLFETKDMSASAGDSQCQGAVAAEGSFAGLVNAIQPVCSKAASADSILSTKTEPIACLTAKQSQSNISFSGITVTKDSAGDYQDCGASSMLLMGEPPWCPPCPESSLHSANRSNAVMRYKEKKKTRKFEKKVRYASRKARADVRRRVKGRFVKAGDVYDYDPLNQTRSC 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01706 413 ProSiteProfiles Zinc finger B-box type profile. 43 90 IPR000315 GO:0008270
Pste8g01706 413 MobiDBLite consensus disorder prediction 158 178 - -
Pste8g01706 413 MobiDBLite consensus disorder prediction 158 173 - -
Pste8g01706 413 CDD Bbox1_BBX-like 47 90 - -
Pste8g01706 413 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 400 - -
Pste8g01706 413 CDD Bbox1_BBX-like 4 47 - -
Pste8g01706 413 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Pste8g01706 413 ProSiteProfiles CCT domain profile. 356 398 IPR010402 GO:0005515
Pste8g01706 413 Pfam CCT motif 356 398 IPR010402 GO:0005515
Pste8g01706 413 SMART bboxneu5 4 47 IPR000315 GO:0008270
Pste8g01706 413 SMART bboxneu5 48 90 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01706 Pste-Chr8 11010283 11018165 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01706 1 412 C2C2-CO-like Transcription Factor Family AT3G07650 55.035 4.44e-149 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Pste8g01706 CCT 2.5e-16 CL0281