LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste8g01705	GCAGAGAGTATATGAGACCTTCTCTTCTATATTTTACGTACAATAGAAATGATCCGGTCTTTGAATAGTTTTACGATCTCCAAATGAAGAAAACACCATCCCCTTTGTATCAACCTAGCCGAAGAAAACAGAATGCTAATCCCCAACTTTTTGCTACAAATAATGATACAACGAGGCACAATCCTAAGACTAATTCCGCTCTGAGATCTTTCAAGTATGCTGTCAAGAAATGTGCAGCTGTTTTTTCATTGTTTCTCTATGGCAAAAGAAAATCAGACTCAAATGTAGTTGGAAGTGATGACAGAAAGAATACATCCAAAATTAGAGGGGTGGTATCATCATCAACTGATTTATCATCTGAGAGTAACACCAAGAACTCATCAAAATGGAAGTTTTCTTATTCCTACGCATCATCTAGCACCGCAAGTGGACAACTTGGAATTGGCAACTTCTCCTTTGAAGAAATTTACAAGTCAACTGCAAAATTCTCTCCAGATAATGAAATTGGGCAAGGTGGCTTTGGAACAGTCTACAAGGGAAAGCTTAAAGATGGATCTCTTGTTGCTGTGAAGCGTGCCAAGAAGGAAGTAATACACAATCACTTATTTGAGTTCAAGAATGAAATATACACCTTATCGCAAATTGAGCATCGGAATCTTGTGAGGTTGTATGGATATTTGGAGCATGGAGATGAGAAGATTATTGTTGTTGAATACGTTGGTAATGGTAACCTCCGAGAACATCTAGATGGTATTCGGGGAGAAGGACTAGAAATTGGGGAACGTCTAGACATAGCAATTGATGTAGCTCATGCAATAACTTACCTTCATATGTACACAGATAATCCAATTATCCATAGAGACATCAAAGCATCAAACATACTAATCACAGAGAAGTTAAAGGCCAAAGTGGCTGATTTTGGTTTTGCACGGTTATCTGATGATCCTACGGCAACTCATATTTCAACTCAAGTTAAAGGAACAGCTGGATACATGGATCCCGAGTATCTTAGAACATACCAACTCACTGAAAAGAGTGATGTTTATTCTTTTGGCGTATTACTTGTTGAAATGATGACAGGACGACATCCAATAGAACCAAAGAGACCCATTGATGAGAGAGTGACAATCAGATGGGCAATGAAAATGCTAAAACAAGGAGATTCTGTGTTTGCCATGGACCCTAGGCTGAGAAGAAATCCAGCCTCCATCAAAGCAGTAAAGCAAGTTCTTAAGCTAGCTCTCCAATGCGTCGCGCCTACGAAACAATCAAGACCACCTATGAAGAATTGTGCAGAGGTTCTATGGGAAATCCGTAAAATTTTTAGAGATGAAGCCTATTCTGGTCATCTTCCCCTTCCTTCTCACCATTCTGCAAACTTTCCTCAAAGAGAAAAGAATAAGTTTGGTATCGAAGATAATGACAGCTATAAATTTACCTCTGTACCTAATCATTTTCGTTCATAAATTTTGTTCATTGTTTGTTCAGATTGTCATCACCTTGTCTTGTCAGTTTTGGTTATGCCAGATTGGCCTCAATGTGATAGCAGTTTTTCGGTGCCCGAATGATATATAATCTATTGATTTGCAATGGGTCTTTGATGGATGAAAAAAGGTTTAAATTGTTAATAAAATTTATATTATATGCAACATACTGACGACAACGGAGGAAAGGTGGCTGA	1681	0.3819	MKKTPSPLYQPSRRKQNANPQLFATNNDTTRHNPKTNSALRSFKYAVKKCAAVFSLFLYGKRKSDSNVVGSDDRKNTSKIRGVVSSSTDLSSESNTKNSSKWKFSYSYASSSTASGQLGIGNFSFEEIYKSTAKFSPDNEIGQGGFGTVYKGKLKDGSLVAVKRAKKEVIHNHLFEFKNEIYTLSQIEHRNLVRLYGYLEHGDEKIIVVEYVGNGNLREHLDGIRGEGLEIGERLDIAIDVAHAITYLHMYTDNPIIHRDIKASNILITEKLKAKVADFGFARLSDDPTATHISTQVKGTAGYMDPEYLRTYQLTEKSDVYSFGVLLVEMMTGRHPIEPKRPIDERVTIRWAMKMLKQGDSVFAMDPRLRRNPASIKAVKQVLKLALQCVAPTKQSRPPMKNCAEVLWEIRKIFRDEAYSGHLPLPSHHSANFPQREKNKFGIEDNDSYKFTSVPNHFRS	460

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste8g01705	460	PANTHER	PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA	20	422	-	-
	Pste8g01705	460	ProSiteProfiles	Protein kinase domain profile.	135	414	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pste8g01705	460	FunFam	Calmodulin-binding receptor-like cytoplasmic kinase 3	212	420	-	-
	Pste8g01705	460	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	256	268	IPR008271	GO:0004672\|GO:0006468
	Pste8g01705	460	SUPERFAMILY	Protein kinase-like (PK-like)	116	410	IPR011009	-
	Pste8g01705	460	Gene3D	Transferase(Phosphotransferase) domain 1	212	420	-	-
	Pste8g01705	460	SMART	serkin_6	135	414	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pste8g01705	460	CDD	STKc_IRAK	141	410	-	-
	Pste8g01705	460	FunFam	Calmodulin-binding receptor-like cytoplasmic kinase 1	99	211	-	-
	Pste8g01705	460	ProSitePatterns	Protein kinases ATP-binding region signature.	141	167	IPR017441	GO:0005524
	Pste8g01705	460	Gene3D	Phosphorylase Kinase; domain 1	94	211	-	-
	Pste8g01705	460	Pfam	Protein tyrosine and serine/threonine kinase	138	407	IPR001245	GO:0004672\|GO:0006468
	Pste8g01705	460	MobiDBLite	consensus disorder prediction	1	35	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste8g01705	Pste-Chr8	10990825	10994885	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste8g01705	107	416	Receptor kinase-like Gene Family	AT1G79620	44.479	6.21e-75	251

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-IV	Pste8g01705		PK_Tyr_Ser-Thr	2.9e-52	CL0016