Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01701 AACGTATATGAGCTATTCACACATTCACACATCACATCTCCTGCCCCTCACGCTCCCAATCTCGCACACCTCGCCAGTGACACCCCACACTGTACGCGCCTGCCTCCCATCACAAGCAACCGCTCATGGCACGGTCACTCATCAAATGCGTACGTAGAAACTGAATATACATGCTGCCACTTTGAAAGGTGCCTTGGGAAGGATGTGAATTTACATCAAGATGACTTGTCACTGTTAGGGGAGAAACAGAAGTACTTGAGAAGGCTTCTAGGGAACATCATTGTAGAGCATGTGGAGGGAACCTTTGCTACTGCCTTCCTCCTAATTAGTTGCCTCATGGATCCGTTTGATGATCTTCTACCTGTGGCTCCTGCTGCTCGCACTCGGCCAGGTGCCAAGTTTATTCCAAAGGCCAAATCGAAACAGCTGCCTTCAAAGGAAATACCGGCATCGGAACATGTCACCTCATCTAAAGATGGAATTTCAGGGGATGACTGTCAAAATGCAGTTGCTTCATCTTTAAGCATGCTAGCGGAAAAATCTAAGGGATCCATTCATCTTACTCAGGTAGAAATTCTAAATTCTGAAACGGGAGATCCTAAACAAGTTACTGTGAAAGCAGATAGTGCTGCCATGGTGAATAATTCCACAATCACAGCATCTGAAATTGATTCTGATCAGAATTCTACAAACTTTTTAAAACCAGTTTGTGAGGCAGACCTAGTAGATTTTGAGGGTGGCTCTGTTACAAACTTTGTTCATGAGACCAACCTCGATAATTGTAAGTTATGTGTTCACATTGCTTATCTGTGTGAAACCACTTTTCTTTGTCTCGGACTTCCAGTTCACACTGCTAATGATGTAGAAAATAAATTGAATAATGTGGCTGCTCTATCTGCTAATACTTGCTCAACCATAGATAGGATGAAAGAACCACCTAAAAATGGGGAAGGTTCATTTGGTAGCAACAAATGTTTGGAACTTACGGACAATTCATTGCAACTTGGCACAGATTTGGGCTTCAAAATTTCTTCCGACAATCATTCAAAGTCAAACTTCGGAAAAGAACAAGAGGTAGTAACTGCAGAATTTGAATTGGATCCTTTCAGTGACATCCTCCCTGATCATGGTGCTAGGAATGCTTATAAATTTAAACCCAAGATGAAGCCACGACCTAGAGTAGGCAATACACCAGCAATTTGTTCTGCCTCTGCTTCATCTAATGTTACAATTGGAAAGTCTGTTGCGTTGCCTCTTTCTTGCACAAGTAACTTTCAATCGTTTCAGTCTTGTGGGGATGGCAGTGATGGACTAAACCAATCAACCGGTTTACCTTTGCCCACATCAGATATTCTTAGGGCAACTGATTTACCCAATAAGTTTCATGATACTAGGTCAAGTGTTCCATTCTCTGAAGGCAAGAGCTTGGCAGCAGCAATTCCTTCCCAACTGGATCCTCTGAGTGCTATGAATTCAGAGGATGCAGTCCATAATGGAACTAGCGATTGGCCTTCTAGCTTTGGTAAATCATCAGGAGAGGCAGCAGATATTTTTTCTGGTCTGGAATCCCTTGATGACCTTCTCACCCAAGCTGCCACTGATACAAGAAAGCCAGCTCTTCATTCTTTCAATGAGAAAGGTGCAGAGGAAAATTTTGTCACACCTGCTTGTAGTACTGTTGGCTCTCTTGGGGAATGTGATACTACCCAAGTTCAAAGGTGTCCCGAGTACCATTGCCCCCAAGATTCATTAACCTTCAGTGAAGCTGCCCTCCTCAATGAGGGGGATACTAACACTGACAATAGAAGGTCGGAAACAGAGGAAATTGTGGACTTTGCCTGCCCAGGTGATGTCTTTGATTGTCAATCAATGGATTCTGGCGGAAATCAAACTTCTGAAATTCCAGTGCATGAAGAGTTGACAAATGCTGCAGAGGCTGATCTTTTGCAGGCAGATGTTACAAGGGACAAAGGAGATGTTAATAAGAGAGAAAGGGATGGCTCAACATTGTGTTCTCAAAGGAAGAAGAAAAAATCGTCAATTATTGATGAGGAGGATAAAAGTGGTAAAACCTTAAGGCAACTGAGAAGACGAGCAGTTTGTATACCTGCAAATAGCTCATCGAATGAGGATGTTGAAGATAATTCTGACCTTGACCCTCCTTATAATTCTAATGGAGATGAACTTCCAGAAAATGATGATGACTATGAATTGGATCACTCATCCAAGAAGAAAAAGGTATCAACAAGTTCACAGAAGAAATCTGTGGCTAAAAATGGAAAAACATCTCAAAAGCGTAGAAAGGCTAATGATGATTCAGAAAAAACTAAGGAACTTCCTAAAAAGTTCTCTCATTCAACCCGACGGAGAAAAAGATGTGTGAACAAGGCTTTGCTGGAAATTCCTGAGGATGAACTTGATCTTCAAAGATTGCCTATGAGGGATGTTATTTTACTTGCAGAACATAGAGAGCGACTGGCGAAAAAAGAGGCATCGACTTCAAATAACTCTCCCACCAATCAAAGTGTTGGCAAGGTGATTTTCTTTAGTGAGATAGTGACTTGGAATTTGAGGAGCAACACCAAAGCTATGGAGACGTTGTGCTCAAAGAACAGGATCAACTTGTTGAAGCGATTCAAGCTAATTAATTATCTTTCGAAAATTTGTCGGCAAGCGGATATGAAAATGAGGAAAAGATTGGTGGAGATGGCTGCAGAATTGTCGTTGAGGAAAAGAGTGGTGGAGGGCCAACACAAAACTATTGGTGGAAATTCTCTTCATGAGGCTGGTGGTTATAATGAATGGGAGTACCCAGGCTCAGAAGATGGTAATGACACATTTGATGATCAAGCCAATGAAGGGATTACATCGTCTTCCCAGTTATTCAATTACCAAATTTTACAGGAAAGGACACCTAGGGGAAACTGGTCTAAACAAGATACTGAACGATTTTATGAGGCTGTTAGAACGATGGGCACTGATTTTTCTATGATACAACTTCTTTTCCCTGATAAAACACGCCATCAAATTAAGTTGAAGTTCAAGAATGAAGATAAGAAGAATCGTCTATGTTTAGATGATGCCATAAATAGCCATACAAAAGCTCACTCTCGTGATTTGTGGATTGAGCAAGTAAAACTAGCTTCCACTAAAGCAGAAGACCCAAGTGGAGATGCCTCAGATTTCATGATGGCAGAGGAGGCTGTGGATCTAACAGCTGGAACTAATGAGGTTGCAGAAGAGGTTAAAACAACTAAGGCGGACGCTGATGTTAAAGCACAGGAGGAAAATTTTGAGCAATCCGAGGATGACGACAACGACGATGGCATGCAAAAATGGTCTCAGTATAAAAGTAACTATTAGTGGTCATTTATATATTTACTCAGTGGTAGTTTATACATGATATTATATTTATAATGATTTTTT 3426 0.4136 NVYELFTHSHITSPAPHAPNLAHLASDTPHCTRLPPITSNRSWHGHSSNAYVETEYTCCHFERCLGKDVNLHQDDLSLLGEKQKYLRRLLGNIIVEHVEGTFATAFLLISCLMDPFDDLLPVAPAARTRPGAKFIPKAKSKQLPSKEIPASEHVTSSKDGISGDDCQNAVASSLSMLAEKSKGSIHLTQVEILNSETGDPKQVTVKADSAAMVNNSTITASEIDSDQNSTNFLKPVCEADLVDFEGGSVTNFVHETNLDNCKLCVHIAYLCETTFLCLGLPVHTANDVENKLNNVAALSANTCSTIDRMKEPPKNGEGSFGSNKCLELTDNSLQLGTDLGFKISSDNHSKSNFGKEQEVVTAEFELDPFSDILPDHGARNAYKFKPKMKPRPRVGNTPAICSASASSNVTIGKSVALPLSCTSNFQSFQSCGDGSDGLNQSTGLPLPTSDILRATDLPNKFHDTRSSVPFSEGKSLAAAIPSQLDPLSAMNSEDAVHNGTSDWPSSFGKSSGEAADIFSGLESLDDLLTQAATDTRKPALHSFNEKGAEENFVTPACSTVGSLGECDTTQVQRCPEYHCPQDSLTFSEAALLNEGDTNTDNRRSETEEIVDFACPGDVFDCQSMDSGGNQTSEIPVHEELTNAAEADLLQADVTRDKGDVNKRERDGSTLCSQRKKKKSSIIDEEDKSGKTLRQLRRRAVCIPANSSSNEDVEDNSDLDPPYNSNGDELPENDDDYELDHSSKKKKVSTSSQKKSVAKNGKTSQKRRKANDDSEKTKELPKKFSHSTRRRKRCVNKALLEIPEDELDLQRLPMRDVILLAEHRERLAKKEASTSNNSPTNQSVGKVIFFSEIVTWNLRSNTKAMETLCSKNRINLLKRFKLINYLSKICRQADMKMRKRLVEMAAELSLRKRVVEGQHKTIGGNSLHEAGGYNEWEYPGSEDGNDTFDDQANEGITSSSQLFNYQILQERTPRGNWSKQDTERFYEAVRTMGTDFSMIQLLFPDKTRHQIKLKFKNEDKKNRLCLDDAINSHTKAHSRDLWIEQVKLASTKAEDPSGDASDFMMAEEAVDLTAGTNEVAEEVKTTKADADVKAQEENFEQSEDDDNDDGMQKWSQYKSNY 1120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01701 1120 CDD SANT 975 1016 IPR001005 -
Pste8g01701 1120 Gene3D - 976 1040 - -
Pste8g01701 1120 PANTHER RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B 379 1120 - -
Pste8g01701 1120 MobiDBLite consensus disorder prediction 1081 1096 - -
Pste8g01701 1120 MobiDBLite consensus disorder prediction 764 781 - -
Pste8g01701 1120 MobiDBLite consensus disorder prediction 649 788 - -
Pste8g01701 1120 SMART sant 972 1020 IPR001005 -
Pste8g01701 1120 Pfam Myb DNA-binding like 969 1038 IPR039467 -
Pste8g01701 1120 MobiDBLite consensus disorder prediction 1081 1120 - -
Pste8g01701 1120 SUPERFAMILY Homeodomain-like 966 1020 IPR009057 -
Pste8g01701 1120 MobiDBLite consensus disorder prediction 650 693 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01701 Pste-Chr8 10964080 10973146 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pste8g01701 Myb_DNA-bind_7 2.1e-23 CL0123