Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01694 GCCAATTTTGTTTAAATTCATTTCTTCAAGCATGGTCGTCACTAGCACTTAGCTGCTCTTTCTTATAATTATTTTTTGTGCTGATTTGGTTTCTTTATTATTATTTCTTCTCTTTTCTGGTTACACAGGCAAGGAAAAAGGAAGAAAGAACAGTTTTTTTTTTTTGAATAAGTCTTTCTCTATCTCCAGTTGCTCTCATAAACTCTTGACTCTTTCTGTTGTTTCCTAATTAGGTTAGCACTTATCACATTCATTGTGTTTGGCTTCTCCTCTTGCTTTCCCATTTCTTTTCTCACTAAAAGTTCCATTTTTAATTTCTGGGTCACTGCTTTCTGTGATTCTGTCTCAGTTCCTGTTTGGTATCTGAAAGGGAGGTTCATTGGGATTGCAGGGTTATTTTGTTGTAATTTAGACCAATTGGATAATAGATATTAATCTTCATTCAACATCAATTTGGAGTATTCTCTCTGATTTTTTTTATCAAGTGGGTCTTTTCTAGATTCCTGAGGAGTCTCCTACTCTTAGAAAAAGGTATTCTGATTCCCTTCAAAATGCTTGTGGGTTTATCGTTTATATTGTTTTGGTAAAACTTCCACTTCTGTTCTCATTTCTCTTTACCTTATCTTCCACAGTTTCCACCCAGCAAGTTTCAATCTTCCTGTTAATAAGCCCAAATTGGATTGTATGAACAAGTAGCTTGTGCTTGTAAATTGAATTGATGAAGTGGGAAAATATAACCCTCTCTCCTACTACACCTTCCTCTCCCAGCTCCAACACCAATTGGTTGGTGGAGGATAACAGGAGTACAAAATGGACCCCTGAAGAGAACAAGCTGTTTGAAAATGCTCTTGCAGTGCATGATAAGGACATCCCAGATCGGTGGCACAGAGTGGCTGAAATGATTCCAGGAAAGACAGTAGGGGATGTGATAAGGCAGTACAAGGAATTGGAAGTGGATGTAAGCAATATAGAAGCTGGGTTGATCCCAGATCCTGCCTATAGTACTACTACTTCACCCTTCACCTTAGATTGGGTGACCACTCCTGGTTATGATGGTTTTAAAGGAAGTGGAAAGAGATCTTCCTCAGTGAGAACTCATGAGCATGAAAGGAAGAAAGGAGTGCCTTGGACTGAAGAGGAACATAAATTGTTTCTACTGGGTCTGAAGAAGTATGGGAAAGGTGACTGGAGAAATATTTCTCGCAATTTTGTGATTACTAGAACCCCAACACAGGTGGCTAGCCATGCTCAGAAATACTTCATAAGGCAACATTCAGGAGGCAAAGACAAGAGGAGGGCTAGCATCCATGACATAACAACAGTGAATCTCACTGAAACCACCACAACTTCTTCAGAAGACACCACTAGATCCACTTCACCTCATGTGCTTTCACAGCATCAGCCAAATTCTACTCCTACTACACCAAGAACTCATTTTCAATGGAGTAACCAGTCTAGCACAGGAGTAGCTATGACTCTCAACCCTGCTCATGAAAGAGTCTTCATGTCTCCTTATGGTGCTAACTCTTTTGGGGTTAAACTTGAGGAACAGAATCTGCACAAGAGTGCTCTTCATGACTCTTCTTACTTGGGACCTCAGACACAGAACATGGTTTTCCGAATGCAACAGTCCTCACAACACTAATCCTATGCCTTAGAGCTTGTTATAGTGAATTATTAATGGGTAGAACCAGAATCTTCTGTCCATTTCAATAAGTACAGTGCTTGAGTTGAGCTTTTTCCCAAGTTCTATGTGAATATCCTTAGAATGTTGGTTAGTTATGAGCCTGAAGGAAGGTACATACATTTGTTTCTTCAACAAATAAAAAAACTTCCTGAAAGGAGTGGCAGGCAACCAAGTCCCCAACGTTAGTCTTGGTTTTTCTATGTTGTCTAAGAATAATGGATTTCAAGCTATGTGTATAATGTAATGTCAACTTGGAAGAGAAGAGACTTCAAATTTGATAACTAGCTAGGCTTATATGTACGTGGAGGATACTGTTACTGGTATTTAATTCAAATCAAAATATTATTATTTGAGAAATACATAATCT 2054 0.3866 MKWENITLSPTTPSSPSSNTNWLVEDNRSTKWTPEENKLFENALAVHDKDIPDRWHRVAEMIPGKTVGDVIRQYKELEVDVSNIEAGLIPDPAYSTTTSPFTLDWVTTPGYDGFKGSGKRSSSVRTHEHERKKGVPWTEEEHKLFLLGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQHSGGKDKRRASIHDITTVNLTETTTTSSEDTTRSTSPHVLSQHQPNSTPTTPRTHFQWSNQSSTGVAMTLNPAHERVFMSPYGANSFGVKLEEQNLHKSALHDSSYLGPQTQNMVFRMQQSSQH 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01694 308 ProSiteProfiles SANT domain profile. 137 185 IPR017884 -
Pste8g01694 308 Gene3D - 24 90 - -
Pste8g01694 308 SUPERFAMILY Homeodomain-like 30 82 IPR009057 -
Pste8g01694 308 ProSiteProfiles Myb-like domain profile. 24 78 IPR001005 -
Pste8g01694 308 ProSiteProfiles Myb-like domain profile. 129 181 IPR001005 -
Pste8g01694 308 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 129 185 IPR017930 -
Pste8g01694 308 MobiDBLite consensus disorder prediction 198 247 - -
Pste8g01694 308 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 26 258 IPR043363 -
Pste8g01694 308 Pfam Myb-like DNA-binding domain 136 181 IPR001005 -
Pste8g01694 308 Pfam Myb-like DNA-binding domain 31 75 IPR001005 -
Pste8g01694 308 FunFam Transcription factor SRM1 24 91 - -
Pste8g01694 308 SUPERFAMILY Homeodomain-like 131 185 IPR009057 -
Pste8g01694 308 SMART sant 133 183 IPR001005 -
Pste8g01694 308 SMART sant 28 80 IPR001005 -
Pste8g01694 308 MobiDBLite consensus disorder prediction 1 21 - -
Pste8g01694 308 ProSiteProfiles SANT domain profile. 27 82 IPR017884 -
Pste8g01694 308 FunFam transcription factor MYB1R1 135 186 - -
Pste8g01694 308 CDD SANT 136 181 IPR001005 -
Pste8g01694 308 NCBIfam myb-like DNA-binding domain, SHAQKYF class 132 184 IPR006447 GO:0003677
Pste8g01694 308 MobiDBLite consensus disorder prediction 185 247 - -
Pste8g01694 308 CDD SANT 31 77 IPR001005 -
Pste8g01694 308 Gene3D - 135 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01694 Pste-Chr8 10885769 10888183 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste8g01694 Myb_DNA-binding 1.5e-12 CL0123