Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01689 ATGGATGTCATGGTAAGAGGAGTAAGTCATGGTGCTAATGGCTTTCAAATTTATGGGTGTGAAGTTAAAAACCGTAGCAACCCTCCTTTGACAGCCATAGCCATAGATAGGTTCTTATGTGGCCACTTACCTCACCATCAACAACACTCAAGGAACACTGAGGAGGCTTTGAAATGGACAAACATCAACCAAAGCCCTACCTTTTGCCTGAAAGATATGAAAGTTTCTGGTAAGAATATTGCGAAAGTGGGGAGAAGGAGAAGCAAGAAACTGTCTTCTGTGTGTTGGATCAAAGGACAGTGGAATAAAGAAGAGGACAGGAAACTGATATGGTTGGTGAAGCAATATGGTGAAAAGAAATGGGCTGAAATAGCTGAGAAGTTGGAGGGAAGGGTTGGCAAGCAGTGTCGAGAAAGATGGAATAATCATTTGCGTCCTGATATCAAGAAAGATAGATGGAGTGAAGAAGAAGAGAGGATACTAGTAGAGAGCCATGCAAGGCTCGGAAATCGTTGGTGCGAGATAGCAAAGCTTATTCCAGGAAGATCAGAGAATGCCATAAAGAACCATTGGAATGCTACAAAAAGGAGACAGAACTCAAAGAGAAAGAACAAGAAGACTAAGGGCTCTAATGGAAAGCCACATTCCTCTATACTTGAAGACTACATCAGAAGCAAGACTCAAACGGGCAGCAACCCCGCACCTGAAATCATCACTGCCACTGATACCATCGACACAGCACTCTCACAGGACAATGCAGAAAACCCTTTGTTCTATGAACCTGTTGCTAATGAAGCACTCTTGATGCAGCAAGTTTTGATGGAGAATCAGGATCATAGATCATTTGGCAATGTTGAAACCTCTAAGCAGTTTAAGATGTCTCCAACCTCATACGTGGATTACTCTCAAACGAATGTTGATGATGTGAGTGAGTGTGGATATGTGTATTCTCTCCAATACCCAGATAATAACATGCACTTGAATGATAGTCTCTTCCCTAGAGAGACTCATCCTACCCCATTAAATTACCTTCCCTCGGATCTCTATCTTTCTCACTTGTTCAACGTAGCATCCGGTTATGGGAACCAAAACCTGAACATAGATTTTCTGCAAAAGGAGAGATGGATTTGA 1131 0.4226 MDVMVRGVSHGANGFQIYGCEVKNRSNPPLTAIAIDRFLCGHLPHHQQHSRNTEEALKWTNINQSPTFCLKDMKVSGKNIAKVGRRRSKKLSSVCWIKGQWNKEEDRKLIWLVKQYGEKKWAEIAEKLEGRVGKQCRERWNNHLRPDIKKDRWSEEEERILVESHARLGNRWCEIAKLIPGRSENAIKNHWNATKRRQNSKRKNKKTKGSNGKPHSSILEDYIRSKTQTGSNPAPEIITATDTIDTALSQDNAENPLFYEPVANEALLMQQVLMENQDHRSFGNVETSKQFKMSPTSYVDYSQTNVDDVSECGYVYSLQYPDNNMHLNDSLFPRETHPTPLNYLPSDLYLSHLFNVASGYGNQNLNIDFLQKERWI 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01689 376 FunFam Transcriptional activator Myb isoform A 97 150 - -
Pste8g01689 376 MobiDBLite consensus disorder prediction 194 210 - -
Pste8g01689 376 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 149 199 IPR017930 -
Pste8g01689 376 MobiDBLite consensus disorder prediction 186 217 - -
Pste8g01689 376 ProSiteProfiles Myb-like domain profile. 145 195 IPR001005 -
Pste8g01689 376 SMART sant 97 146 IPR001005 -
Pste8g01689 376 SMART sant 149 197 IPR001005 -
Pste8g01689 376 Gene3D - 151 217 - -
Pste8g01689 376 ProSiteProfiles Myb-like domain profile. 98 144 IPR001005 -
Pste8g01689 376 CDD SANT 152 195 IPR001005 -
Pste8g01689 376 PANTHER MYB PROTEIN-RELATED 89 212 - -
Pste8g01689 376 CDD SANT 101 144 IPR001005 -
Pste8g01689 376 Gene3D - 97 149 - -
Pste8g01689 376 SUPERFAMILY Homeodomain-like 97 191 IPR009057 -
Pste8g01689 376 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 98 148 IPR017930 -
Pste8g01689 376 Pfam Myb-like DNA-binding domain 101 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01689 Pste-Chr8 10820562 10822175 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01689 28 365 MYB Transcription Factor Family AT5G58850 37.949 2.77e-68 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste8g01689 Myb_DNA-bind_6 1.3e-16 CL0123