Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01681 GTTGCACTTCACCACCCCAATAGACAAAAGAAGTGGAAACTGGAAGCCACAACCAATAATGAACAGTTACTCAGAATCAGAAGCTATGGATCAAGATTTGGAGGGTTGCAACTCTTCTAATTCAATGACTCCGATGGTGAGAAAGAAGTCAGAAGTAGTTGTGGTCACAAATAACAACTCTCGTTTTCAAATGCTTAGAAATTTCATGGCCAATTTACGAGAGGTCTTTCTTGGCACTAAGCTTGTTGTGCTTTTTCCGGCAGTCCCCTTGGCCATTGTTGCAGATTTTTATGGCTTTGGAAGGCCTTGGATTTTTGCTTTCAGCCTTCTTGGACTTGCTCCTCTAGCTGAACGTGTCAGCTTCTTGACTGAGCAAATTGCATATTTCACTGGCCCAACAGTTGGAGGGCTTCTGAATGCCACTTGTGGAAATGCAACAGAGATGATCATAGCGTTATTAGCACTTCACCAGAACAAAGTACATGTTGTCAAGTTGTCCCTGCTGGGTTCCATTCTCTCAAATCTTCTCTTAGTTCTTGGCAGTTCACTCCTCTGTGGTGGTTTAGCCAATCTTAAGAGGGAACAAAGATATGACAGAAAACAGGCTGATGTAAACTCACTGCTTTTATTGCTGGGGTTGCTGTGCCATTTGTTACCATTACTGTTCAGATATGCCTTAGGAGGGGGCGATCATTCTATAGCCACTAGCACTCTTCAGTTGTCCAGAGCTAGCAGCGTTGTTATGCTTCTAGCATACGTTGCTTACATCTTCTTCCAATTAAAAACTCATCGAAAATTGTTTGATGCACAAGAGGTGGACGAAGATGAAGAGAAAGCAGTGATAGGGTTTTGGAGTGCATTTACCTGGTTGGTGGGTATGACATTGGTCATATCTTTACTTTCTGAATATGTTGTGGGAACAATTGAGGCTGCTTCAGATTCTTGGGGCATTTCTGTAAGCTTCATCAGCATCATTTTGCTACCAATTGTTGGAAATGCTGCAGAACATGCTGGTTCAATCATATTTGCTTACAAGAACAAGTTGGACATTTCTTTAAGTGTTGCTATGGGATCTGCAACTCAAATTTCTATGTTCGTGGTTCCATTAAGCGTAGTTGTTGCATGGATGATGGGTATAAAAATGGATTTGGACTTCAGCCTTCTTGAAACTGGATGTCTTGCTTTTACAATTATAGTTACAGCGTTCACTTTACAGGATGGAACTTCACACTACATGAAAGGGGTGGTTCTTACTCTATGTTACATTGTCATTGGGGCATGCTTTTTTGTTCTGAAAACTCCTCTGATTGGCCAAGATCCTAGGGCCAATTTTGGAGCTAAACCATCCTTTGAAGCCATCCTCACATGAATTGTTTTGTTTCCCCTACAAAGAAAAACAATGTCACCTATGGATAACTGAACTTCGTCTCGGGGATCAAATGCAGATATGGATATTTTTATTCATGGTGGAAATTGTGTGCTTGACTGAGGCTTTAAGCAACATCATAAACTAAAAGTAGAGATTTCAATGCTTTATATAATTCTTTCTTCATAATAAGACTTAATAATGACGTTTTGGGTTGAAATAGCCCTATGTAATTTCCTTTGTTTTAATTCTGTCTTCCCTTCTTACCCTTTATAAATATGATAATCTTCCATGTACTTAATTCATGTACTCACTACTTTCACTACTTT 1695 0.3982 MNSYSESEAMDQDLEGCNSSNSMTPMVRKKSEVVVVTNNNSRFQMLRNFMANLREVFLGTKLVVLFPAVPLAIVADFYGFGRPWIFAFSLLGLAPLAERVSFLTEQIAYFTGPTVGGLLNATCGNATEMIIALLALHQNKVHVVKLSLLGSILSNLLLVLGSSLLCGGLANLKREQRYDRKQADVNSLLLLLGLLCHLLPLLFRYALGGGDHSIATSTLQLSRASSVVMLLAYVAYIFFQLKTHRKLFDAQEVDEDEEKAVIGFWSAFTWLVGMTLVISLLSEYVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAYKNKLDISLSVAMGSATQISMFVVPLSVVVAWMMGIKMDLDFSLLETGCLAFTIIVTAFTLQDGTSHYMKGVVLTLCYIVIGACFFVLKTPLIGQDPRANFGAKPSFEAILT 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01681 436 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 20 413 IPR004713 GO:0006812|GO:0008324|GO:0016020
Pste8g01681 436 NCBIfam calcium/proton exchanger 48 410 - -
Pste8g01681 436 FunFam Vacuolar cation/proton exchanger 113 256 - -
Pste8g01681 436 FunFam Vacuolar cation/proton exchanger 257 411 - -
Pste8g01681 436 NCBIfam calcium/proton exchanger 67 410 IPR004798 GO:0006816|GO:0015369
Pste8g01681 436 Gene3D - 113 410 IPR044880 -
Pste8g01681 436 Pfam Sodium/calcium exchanger protein 84 241 IPR004837 GO:0016020|GO:0055085
Pste8g01681 436 Pfam Sodium/calcium exchanger protein 267 405 IPR004837 GO:0016020|GO:0055085
Pste8g01681 436 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01681 Pste-Chr8 10733154 10737395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01681 16 415 Antiporters AT2G38170 66.176 0.0 523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01602 7 14803364 14808414 Pste8g01681 8 10733154 10737395 PCT