Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01659 CTCAAGACACTTAAACACACACAAAAGCTAAAACCCAAAATATAAAAAGACAGACCAATTCCAACGTTTGAATTTTGACTGAAGAGAAGGAGCACCATCACCAACATAACATGTCTTGCTCCGTCGCCGTTTCCAATTCGCCGGTCTTTTCTCCTTCTTCCTCGCTCTTCTGCAACAAGCCTTCCATCATTTCTTCTTCTCCCGAATCCCTTTCGCTCAATTTGTCGCATCTCAAGCCTTCCAACTCCGCTACGGCGTCGGCTTGTTCATCACCTTCGGCTACTGCTGCTGCTTCTTCCTCTCCTTCTTCTCCCTTTCGCCTTCGCCTTCCCAAGGTTCCTACTGCCTTCTCCGCCTCTTCTTCTGCTTCCTCTACCTCTCCAAACGGTACCGTTTTGAAGAGGAAGCGACCCGCCAGGCTCGACATACCCGTTTCCTCTCTCACCTTCGCGGTTCCCCCCACGCCCTCCGCCGTCCCGCGTGATGGCCTCGAGGCTCAGGAAGATGGCTTTGGGGTTTACTGCAAGAGAGGGAGGAGGGAGTACATGGAGGATCGCTACACCGCCGGGGATAACCTTCGGGGAGAACACAAACTGGCCTTTTTTGGCATATTTGATGGACACGGAGGTGCCAAGGCTGCTGAATTTGCTGCAAATAACTTACAAAAAAATGTGTTGGATGAAGTGATCATGAGAGATGAAGATGATGTTGGGGAGGCAGTGAAGCGTGGGTACCTAAACACTGATTCGGATTTCCTGAAGGAGGATGTCCATGGTGGCTCTTGCTGTGTGACAGCATTGATCAGGAATGGCAACCTTATTGTGTCCAACGCGGGTGATTGCCGAGCTGTCATTAGCAGAGGGGGTGTTGCTGAGGCCCTAACATCTGATCACAGGCCTTCAAGGGAAGACGAAAGGGACAGAATTGAGAGCCTGGGTGGCTATGTCGATTTGTGCCGTGGTGTTTGGAGGATCCAGGGATCTCTGGCTGTCTCTAGGGGAATTGGAGATAGACACCTGAAACAGTGGGTGACGGCAGAACCTGAGACCAAAGTTCTCAGAATTGAACCTGAACATGACTTCTTAATCTTAGCTTCAGATGGACTGTGGGATAAGGTTAGTAATCAGGAAGCTGTAGATATTGCTCGTGCTTCCCTCGCAGGGAACAACAAATCACAACCATTGCTGGCATGTAAAAAGCTCGTAGATTTGTCTGTTTCGCGAGGCTCCATGGATGATACAAGTGTTATGCTACTCAAATTGGAGCACTATATCTAAAGTTTTATTATTAGTACAACAGAAGGAGGTGGTGCATAAGTTCTCTCTAGATTGCAGTTGAGATGACATTGTGAGGTCACAATTGCATGGCAGTATTTGATTTTTAACCTTGGCGGTGCCTGATGATTATGGTAGAGTAGCTTATTCTTTTCTGTATATATAAAAATCTGACCACATTATTGAAATTTTTTGTACCCGCATATGGTGGGGAGAAGGGATATTAACAATAACATTTAGTAATTATTTTTCATTTATTTTAGATACATTTAATGTAATAAACCTACAATTGTCACTTTAGATACAGTATTATATATATTTGGTAATTCATTTATTTTTTATTATCTAATTTGTGATGGATTACACAATTTTTTGTGATGAAATAATGCAAAGTTGTTGAACG 1677 0.4478 MSCSVAVSNSPVFSPSSSLFCNKPSIISSSPESLSLNLSHLKPSNSATASACSSPSATAAASSSPSSPFRLRLPKVPTAFSASSSASSTSPNGTVLKRKRPARLDIPVSSLTFAVPPTPSAVPRDGLEAQEDGFGVYCKRGRREYMEDRYTAGDNLRGEHKLAFFGIFDGHGGAKAAEFAANNLQKNVLDEVIMRDEDDVGEAVKRGYLNTDSDFLKEDVHGGSCCVTALIRNGNLIVSNAGDCRAVISRGGVAEALTSDHRPSREDERDRIESLGGYVDLCRGVWRIQGSLAVSRGIGDRHLKQWVTAEPETKVLRIEPEHDFLILASDGLWDKVSNQEAVDIARASLAGNNKSQPLLACKKLVDLSVSRGSMDDTSVMLLKLEHYI 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01659 388 ProSitePatterns PPM-type phosphatase domain signature. 164 172 IPR000222 GO:0043169
Pste8g01659 388 SUPERFAMILY PP2C-like 134 385 IPR036457 -
Pste8g01659 388 SMART PP2C_SIG_2 131 384 IPR001932 -
Pste8g01659 388 MobiDBLite consensus disorder prediction 81 95 - -
Pste8g01659 388 Pfam Protein phosphatase 2C 134 376 IPR001932 -
Pste8g01659 388 MobiDBLite consensus disorder prediction 47 68 - -
Pste8g01659 388 CDD PP2Cc 133 384 IPR001932 -
Pste8g01659 388 MobiDBLite consensus disorder prediction 81 101 - -
Pste8g01659 388 ProSiteProfiles PPM-type phosphatase domain profile. 133 384 IPR001932 -
Pste8g01659 388 SMART PP2C_4 122 382 IPR001932 -
Pste8g01659 388 FunFam probable protein phosphatase 2C 25 126 387 - -
Pste8g01659 388 PANTHER PROTEIN PHOSPHATASE 2C 72 381 IPR015655 GO:0004722|GO:0006470
Pste8g01659 388 Gene3D - 133 387 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01659 Pste-Chr8 10472463 10474787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01659 1 388 PP2C-type Phosphatase Gene Family AT2G30020 63.524 1.94e-169 477
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01659 8 10472463 10474787 Pste8g01659 8 10472463 10474787 ECH
Pste7g01639 7 15245509 15247816 Pste8g01659 8 10472463 10474787 ECH
Pste7g01639 7 15245509 15247816 Pste8g01659 8 10472463 10474787 PCT