Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01650 GTTTAGGCCACTTTCTCTTCCCACCAAGGAGTAAAAGTAAACACTAGTACCAAAGCAAAACAGCATGCTTTTTCAACTATAAGCTTCATTGTGTTGGATGATGCAAACTCTCCCCTCTTGGGTTGTGGAAGCAGGCTGCAACATCTTTTACTCAAAGGGTTGCACCCCTAGCCTATGAGCATGCCCAAGTTAAGCTCTTTATTCCAAGGGCTTGAAGACAACGTGTGTGTCCTCTGAAAACAACAGAGGAAAAATGCGTGGCCTCAAGCTCATTGAACGCTTCAAGAGCACCCAAGTTCATGCCCTCAATTCAGAAGCAACTAGCAGAAGAAACAAGGCCACAGGGGGAGCCATCACAATCAGATCATTGGTGTCAAAGTCCAAATCCAACTCCACAACAACCTCAGCACTTGCAAACCTTGTTGTACCTCTTCAGCTTCCTTCTGCTGACACTGTTGAACCTTCATTAGAACCTTACCTTAAACTCATCAACCTTGTGGAGGCCTTGGCAGAACTTTACCAGAGGCAAGAGTGTTGCCTTCAGTCTGAAAAAGCCTCACTGTGTGTGGAGCAGTTCACGCTTTCGCGCAGCCTCGGAGACCAGAAGCTTCTGAGAAGATGTCTCAGGACAGCACGGCAAAACGCTGAAGATGTACTTTCCAAGGTTGTGCTTTCGGCATGGTTGAGGTTTGAGAGGAGAGAGGATGAGCTTCAGGGTGTGTCTTCTATGGATTGTGGTGGTTGTGTTCTTGAATGTCCAAAGATGAATTTGGTACACGGGTTTAGTCCCTTTTCAATCAATGATAGGTGCCAGTGTCCACAAGGGACTAAACAAGAAACTAGCATTGAAGAAAGTGGGTGTTTGTGTTTTCCAGATGAGGAAAAGGATGTTTCTTTTTGTATTGGGAGTGAGGAAATTGATTGTGTTAGGTGGAGAATTGCAGCTCTATCGGACCCTTTTAAGGCCATGCTTTATGGTGGCTTTGCTGAGTCCAATATGAGGAAGATTGATTTCAGCAAAAGTGGGATATGCCCAAAGGGTATGAGGGCAATGGAGTTGTACAGCAGGGCTAAGAGGTTGGACCTTTTCTGTCCCACGACTGTTTTGGAGCTTCTTTCCTTTGCCAATAGGTTCTGTTGTGAGGATATGAAGGCTGCTTGTGATGCTCATTTGGCATCAACTCTTGGAAGTGTTGATGATGCATTGGTGCTTATGGACTATGGATTGGAAGAGAGAGCACCCCTTCTCGTGGCTTCCTGCGTACAAGTGTTGCTTAGGGAGCTACCAAATTCTTTGTGTAATTCTAAAGTTATGAATGTCTTTTGTAGTTCTGAGGGAAGGAAAAGGTTGGCCATGGTAGGGTATGATTCTTTCTTGCTGTATTATTTCCTGAGCCAGGTGGCTATGGAGGAAAGCATGGTATCAAAAACTACAGTGTTGTTACTGGAAAGATTGGGGGAGTGTGCTACTGAAAGGTGGCAGAAGGCCCTTGCATTCCATCAACTGGGTTGTGTGCTGCTTGAAAGGAAAGAATATAAAGAGGCTCATCATAGTTTTGAGTTAGCAGCTGAGGTAGGTCATGTGTATTCTGTGGCTGGCATGGCCAGAACCAAGTACAAGCAGGGTCAGCCATATTCAGCCTGTAAGTTAATCAGTTCACTCATATTTGAGCACAAACCTGCCGGGTGGATGTATCAGGAGCGAGCGCTTTACAATATGGGACGGGAAAAAAGTTTTGATTTGGATGTTGCAACTCAACTGGACCCCTCCCTTTCTTTTCCATATAAATATAGAGCCCTGGCAAAGGTGGAGGAGAAGCAGATAAAGGCTGGAATCTTAGAGCTTGATAAGATTATTGGATTTAAGCTCTCTCCTGATTGCTTGGAATTGCGGGCTAGAATGTTCATTGCTCTTAAGGATTATGACAGTGCCATAAGAGATATCAGGGCATTGTTAACTTTAGAACCAAATTATATAACTTCAAATGAAAAGATCACAGGGAAATACTTGGTTCATCTCCTTAGCCATGCGGTTCAGCAAAAGAGTCAGGCTGAATGCTGGATGCAATTATATGAACAATGGTCTTCTGTAGATGATGTTGGTTCTTTGGCTATTATACATCAGATGCTGGAGAATGAGCCTGGAAAGAGCCTTCTGGAGTTTCGCCAGTCTCTACTCCTTTTGAGGTTAAATTGTCAAAAGGCTGCAATGCGCAGCTTGAGGATGGCCAGAAATCATTCTAGCTCAATGCAAGAAAGGTTAATTTATGAAGGATGGATTCTATATGATACTGGCTATCGGGATGAAGCTCTGGCTAGAGCTGATAGGTCAATTACAATTCAGAGATCATTTGAAGCCTATTTTCTGAAAGCATATGTGTTAGCAGATACAAGTCTGGATCCTGAATCTGCTTCTGACGTTATTGAACTTCTGGAAGAAGCACTTAAATGTCCTTCAGATGGTCTTCGTAAAGGACAAGCACTAAATAACTTGGGGAGTATTTATGTAGATTGTGGTAAGCTTGATCTTGCTAAAGCGTGCTACGAGAATGCCCTTGCAATTAGGCACACAAGAGCTCATCAAGGTCTAGCACGAGTTTATCATCAGAAAAATCAACGAAAAGCTGCGTATGATGAGATGACCAAGCTAATTGAGAGGGCAGAGAGCAATGCCTCAGCATATGAGAAACGATCAGAATACTGTGACCGTGAGCTGGCAAAGGTTGATCTTGATGTAGCAACCCAATTGGATCCTTTAAGGACATATCCGTATAGATACAGGGCAGCAGTGATGATGGATGAACAAAAGGAATCTGAAGCTGTAGAAGAGCTCACCAAGGCCATAAATTTCAAACCTGACTTACAAATGCTTCATCTCCGAGCAGCATTTTATGAGGCAATAGGGGACCTATCGTCAGCTCTTCAAGATTGTCAGGCAGCTCTATGCTTAGACCCTAGCCATACAGACACACTTGATCTGTATCAAAGGGCACGAAAACTAAGCTTTTAATCATAAATGGTATGGACATCGTGGATATCTTGGCAAAGAAATGGCTGGCGCACCCCAACTTTGTTAAAACACAAGGAGGGGACATCGATAGTCCAACTGTTGAAACAATGCCAAACCCCCCCAAAGAAGCAATTCTTGGATGATTTGAGGAAAAGATGGAGTCATGTGTTTCACGTGATCAAATAGGAGGATGATTCATGTGTACATCAGAAGATGTTCAGAATAGTAACTCCATTGATATAATATAAATTCTTGTGAGCCTTGTGCACATAATTTATCTCACACTATTCACACAGATGTACAGTGACAGGGTTATGATTATAGCGATTCACACTTCGTTTCCTACATTGTGTAACTTATTGTTCTGGATGAAAAGATTTATTTTAATGTCTTGCCAAAGAAAATGATAAATGTTTCCCACACATCAAATAATAATAAATTGATGATGATG 3461 0.4279 MRGLKLIERFKSTQVHALNSEATSRRNKATGGAITIRSLVSKSKSNSTTTSALANLVVPLQLPSADTVEPSLEPYLKLINLVEALAELYQRQECCLQSEKASLCVEQFTLSRSLGDQKLLRRCLRTARQNAEDVLSKVVLSAWLRFERREDELQGVSSMDCGGCVLECPKMNLVHGFSPFSINDRCQCPQGTKQETSIEESGCLCFPDEEKDVSFCIGSEEIDCVRWRIAALSDPFKAMLYGGFAESNMRKIDFSKSGICPKGMRAMELYSRAKRLDLFCPTTVLELLSFANRFCCEDMKAACDAHLASTLGSVDDALVLMDYGLEERAPLLVASCVQVLLRELPNSLCNSKVMNVFCSSEGRKRLAMVGYDSFLLYYFLSQVAMEESMVSKTTVLLLERLGECATERWQKALAFHQLGCVLLERKEYKEAHHSFELAAEVGHVYSVAGMARTKYKQGQPYSACKLISSLIFEHKPAGWMYQERALYNMGREKSFDLDVATQLDPSLSFPYKYRALAKVEEKQIKAGILELDKIIGFKLSPDCLELRARMFIALKDYDSAIRDIRALLTLEPNYITSNEKITGKYLVHLLSHAVQQKSQAECWMQLYEQWSSVDDVGSLAIIHQMLENEPGKSLLEFRQSLLLLRLNCQKAAMRSLRMARNHSSSMQERLIYEGWILYDTGYRDEALARADRSITIQRSFEAYFLKAYVLADTSLDPESASDVIELLEEALKCPSDGLRKGQALNNLGSIYVDCGKLDLAKACYENALAIRHTRAHQGLARVYHQKNQRKAAYDEMTKLIERAESNASAYEKRSEYCDRELAKVDLDVATQLDPLRTYPYRYRAAVMMDEQKESEAVEELTKAINFKPDLQMLHLRAAFYEAIGDLSSALQDCQAALCLDPSHTDTLDLYQRARKLSF 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01650 918 SUPERFAMILY POZ domain 204 308 IPR011333 -
Pste8g01650 918 SMART tpr_5 541 574 IPR019734 GO:0005515
Pste8g01650 918 SMART tpr_5 870 903 IPR019734 GO:0005515
Pste8g01650 918 SMART tpr_5 741 774 IPR019734 GO:0005515
Pste8g01650 918 SMART tpr_5 412 445 IPR019734 GO:0005515
Pste8g01650 918 Coils Coil 786 813 - -
Pste8g01650 918 SUPERFAMILY TPR-like 723 911 IPR011990 GO:0005515
Pste8g01650 918 ProSiteProfiles TPR repeat profile. 741 774 IPR019734 GO:0005515
Pste8g01650 918 Pfam Tetratricopeptide repeat 742 770 IPR019734 GO:0005515
Pste8g01650 918 Gene3D Tetratricopeptide repeat domain 814 917 IPR011990 GO:0005515
Pste8g01650 918 PANTHER ETO1-RELATED 1 916 IPR044631 GO:0010105
Pste8g01650 918 SUPERFAMILY TPR-like 412 770 IPR011990 GO:0005515
Pste8g01650 918 Gene3D Potassium Channel Kv1.1; Chain A 204 349 IPR011333 -
Pste8g01650 918 Gene3D Tetratricopeptide repeat domain 396 612 IPR011990 GO:0005515
Pste8g01650 918 Gene3D Tetratricopeptide repeat domain 636 806 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01650 Pste-Chr8 10345079 10349769 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01650 742 901 Glycosyltransferase AT3G04240 27.647 2.75e-08 55.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01681 7 15634165 15638687 Pste8g01650 8 10345079 10349769 PCT