Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01649 AATTTAAAAGATCTTTGTCTTGAAGGAACACTACCACCAGAAATTGGAAAGCTGGCTCACATAAAATCAATCATTTTGCGTAACAATTCTTTCTTTGGAGAAATTCCCAAGGAGATACTGTACTTAGAGGAGTTGGAAGTCCTTGACTTGGGATATAACAACTTTAGTGGATCACTTCCATTTGACCATGGCAATATGCCATCCCTGACCACTCTTTTATTAGACAACAATTACTATTTAACCAACTTAACTCCAGAACTGTATAAGGTCAAGGTGAATTCTGAATTTCATGCCAATGAAGAACAACTAGCTGGTGCCACCACAAGAGAAGCATTTGTTGACAGATGTAGTTTATGGCACAATGACCAACATGGGGATAGAGTATACAGGAGACAACTCAAAGTAGCAAATGCTGTTAATACAGCCAGAATCCAAGGGAATGTTAAACAAGGGACACTTAAACAACCAGCATCGCATTTCCCTTCTTCATTACCTCCAGATTTTGAGCCTTTCTCATCATCGCCGTTTTCACCATCAGAAAGTCCATATTCACCAGGATCAGTTCCATTATCATATTCGCCATCACCATCGCCACCTTTCTTCAGTAATTTTTTCACTCCTTCACCCTCTCCTTCACCTTTAGTGTTGCCAACTCCAGACATATCACCCCCAGCATACACACCACTCAGTGTGTCTAAACCACCAGAATTTAATTGGGTTTCAGCCCCTAGTCCTTCTCCATTTTCTAACCAGGAGAATACTTACAGTTCCAATCGAATGCATCATTCGGTTATAATCTGGTCTGTAATTGGTGGCTTCTCCTTCTTGATTTTGGTATCGGGCATTATTTTTGCTTGCTTCCAAACTAGGAAGGTTGTGGCTGTTAAACCTTGGTCCACAGGGTTGAGTGGCCAGCTGCAGAAAGCTTTTGTTAAAGGTGTGCCAAGTCTCAAACGAGGAGAAATTGAAGCAGCTTGTGAATATTTCAGCAACATTATTGGTTCTCTTCCTGATGGAACTGTCTACAAGGGGACTCTCTCCAGTGGAGTGGAAATAGCTGTAGCATCCTCTGCAGTGACCACAGCTCAAATCTGGTCAAAAAGTATGGAGGCTCATTTCCGTAAGAAGATTGCGACATTATCTAGAGTGAACCACAAGAACTTTGTGAATCTTATTGGCTATTGTGAAGAGAATAAGCCATTCTCAAGAATGATGGTGTTTGAGTACGCTCCCAATGGAACACTCTTTGAGCATCTACACATTAGAGAAGCAGAAGAACTAAATTGGACAATGAGAATGAGGATAGCCATGGGAATAGCCTACTGCCTAGAGTATATGCATGACCTTAGACCACCCATTGCCCACAGAAACCTGCAATCTTCCTTTATATACCTTACTGAAGATTATGCTGCTAAAATATCAGATATCACTTTATGGAATGACATGTATGCTACAAAGAATGGATCTGCAACTGCACAACTCTTGGAAACATCATCAGCAGATACCAAGGACAACGTTTACGGCTTTGGAATAATATTGTTTGAGTTGATTACTGGGAGAATTCCCCAAGTGGGGGACAATTACCTTCTGGCAGATTGGGCGGCAGAATATATTAGGTGGGGGAAATCCTTAAGAGATGTTGTGGATCCAAGACTGAACTCTTTGCAAGAAGAAGAGATCGTGGAATGGTCTGAAGTGCTAAGAAATTGCGTACAACCAGATCCAGAGAAAAGGCCAACTATGAAGGAAGTTACATCTAGACTAAAGGAAATCACAGCTATGGGGCCAGATGGAGCAAATCCAAAAGCATCACCACTCTGGTGGGCAGAGATGGCAATTACATCCACAGATTCAAGTTGAGACGTTAGTTTTACAACCCAAATAAAACTGGAATGGTTATTTGTACAGTTAAGCTAAATTTGGAATTCACGCACTTGTCAAATATTTATGTTTATACTCATGTTTTAAAACTAATGTCAACAGAAAAGGCATGTAAAGAACAAA 2004 0.4072 NLKDLCLEGTLPPEIGKLAHIKSIILRNNSFFGEIPKEILYLEELEVLDLGYNNFSGSLPFDHGNMPSLTTLLLDNNYYLTNLTPELYKVKVNSEFHANEEQLAGATTREAFVDRCSLWHNDQHGDRVYRRQLKVANAVNTARIQGNVKQGTLKQPASHFPSSLPPDFEPFSSSPFSPSESPYSPGSVPLSYSPSPSPPFFSNFFTPSPSPSPLVLPTPDISPPAYTPLSVSKPPEFNWVSAPSPSPFSNQENTYSSNRMHHSVIIWSVIGGFSFLILVSGIIFACFQTRKVVAVKPWSTGLSGQLQKAFVKGVPSLKRGEIEAACEYFSNIIGSLPDGTVYKGTLSSGVEIAVASSAVTTAQIWSKSMEAHFRKKIATLSRVNHKNFVNLIGYCEENKPFSRMMVFEYAPNGTLFEHLHIREAEELNWTMRMRIAMGIAYCLEYMHDLRPPIAHRNLQSSFIYLTEDYAAKISDITLWNDMYATKNGSATAQLLETSSADTKDNVYGFGIILFELITGRIPQVGDNYLLADWAAEYIRWGKSLRDVVDPRLNSLQEEEIVEWSEVLRNCVQPDPEKRPTMKEVTSRLKEITAMGPDGANPKASPLWWAEMAITSTDSS 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01649 619 Gene3D Phosphorylase Kinase; domain 1 299 409 - -
Pste8g01649 619 PANTHER PROTEIN MALE DISCOVERER 2 1 616 - -
Pste8g01649 619 Pfam Leucine rich repeat 20 77 IPR001611 GO:0005515
Pste8g01649 619 SUPERFAMILY Protein kinase-like (PK-like) 321 588 IPR011009 -
Pste8g01649 619 Pfam Protein tyrosine and serine/threonine kinase 332 588 IPR001245 GO:0004672|GO:0006468
Pste8g01649 619 Gene3D Ribonuclease Inhibitor 1 116 IPR032675 -
Pste8g01649 619 SUPERFAMILY L domain-like 3 85 - -
Pste8g01649 619 Gene3D Transferase(Phosphotransferase) domain 1 410 598 - -
Pste8g01649 619 ProSiteProfiles Protein kinase domain profile. 327 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01649 619 FunFam Inactive receptor-like serine/threonine-protein kinase 301 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01649 Pste-Chr8 10341688 10344834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01649 8 96 Receptor kinase-like Gene Family AT5G65700 37.000 4.90e-07 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Pste8g01649 PK_Tyr_Ser-Thr 9.5e-28 CL0016