Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01646 GTGATTTACCTCAAAAAGGTGGCATCAAAATATCCGGCGGTTACATTGCAAAATGAGTACACGCATTTATTACTTGTCATCAGTGACTGGCACGAACCTTCTTCTTCGTCTTCTTCTCTGAAGCCAACGGCAGCAATGGCCGCCGCACTGGAGTGCTGGTCCAGCCGCGCCACCACCGCCACCGAGGACGACATGGTGGAGCAAGTCCTCATGCGGTCCCAGCACAGATCCGAAGGCACGACCGTGTCCTCCACCCCGAAAGACCCTTCCTCTGTTCCCGTCCACAAGAAGCTCCAGAAGCTCACTCGCAACGTCTCCGAAGCCATCGCTTCTTTCAGAAACTCCCTAAACCTCGATTCTCCGCCTTCTTCCAAAGCCGATGCTTCTTTCAGGAAACTCGCTTGGGGCAGTGTCGTTCGCAACCTCACTCAGCTCTACCCCGGAAGCCAGCTCCCCGAGAAACTCATGTCCAACATTCGCAAGCATTACGATTCTTTGCCCCTCAGTTATGCACAGGCTGAGTTTGATATGAAGGATGTGTTTCTTCACATAAAGTTGATGGAACAGGCTTCGGAGAGTGACCAGCCTGCGATTTTGATTCAAGAGGAGTGTGATGATGAGGTCCAGGGTTCTGCTTTGAGGCTCACGTTTGCTTGCAATTCTCCGATTTCGTGGCCTGCGATGTCGGGTGCGTTGGATAGTTCCTCCATTTGCTGCAAGAGGATGCAGATCTTTGAGAAGAAGGGTTTCACTCTGGGGGTTGTGCTTCTTGTGGTTCAATCTGGGCATGATAAGTTGGTGAGGACCAGGGTTGAAAATGCTTTGAAGTTTGCCATGAAGAGGCCAAAAAGTGGTGCTGTGAAGCTTCCCTTTGGGCTCTGTGGATGCCAAGAGGAAAATTCTAAAGGGAGAGAGCTTGTGGAGATTGAAGAAGAAACCGGTGATGGTTACCGTGGGAAGGAGTTTGAGAATTCAAGCCAAAGGATTCAGCTTCAGGTGCCTTTGCCATCTTCATCTTTTGTTGTGTCAGTGGATGAATGGCAGACCATAAAGTCAGGTGGGGATGGGATTGAGAAATGGTTGTTGAACTCAGATAGTGTTGACTTTGTTGAGCAGATTGGGCCGAATTCATATAAGGGAGTGTATATGGGGAAGAGGGTTGGGATTGAGAAGTTGAAGGGGTGTGATAAAGGGAATTCTTACGAGTTTGAGCTCCACAAAGGTTTGTTGGAACTCATGACTTGTGGTCACAGGAACATTCTGCAGTTTTGTGGTATTTGTGTGGATGATAATCATGGGTTGTGTGTGGTGACCAAGTTCATGGAAGGTGGCTCTGTTCATGACCTGATGTTAAAGAACAAGAAGCTGCAGAATAAGGATATTGTGAGGATTGCAGTTGATGTGGCTGAAGGGATCAAGTTTATGAATGACCATGGTGTTGCATATAGAGACCTTAATACCCAGAGGATTCTATTGGATAGGCATGGGAATGCTTGTTTGGGAGATATGGGTATAGTCACTGCCTGCAAGAGTGTTGGAGAAGCAATGGAGTATGAAACTGATGGTTATAGGTGGCTAGCTCCAGAGATGATTGCAGGGGACCCAGAGAATGTGACAGAGACATGGATGAGTAACGTTTATAGCTTTGGGATGGTAATTTGGGAGATGGTAACTGGAGAGGCAGCTTATTCTTCATTTTCACCTGTGCAAGCAGCAGTTGGCATTGCTGCATGTGGCCTTAGACCTGAAATTCCAAAAGACTGCCAACAAACTCTAAAATTCATTATGACAAAGTGCTGGAACAACAACCCTTCCAAACGTCCTCAGTTTTCTGAAATTTTAGCCATATTGCTTCGACCAAACAACAGATAAACGGTTATATATATCAAGTTCATGGAAAAGAAAAATTATCACAAGTCCATGGATAAACATGAAGCCTTATATGCTTTTATGGCACTAATGAAAATGTAAATTTTCTGCTTTTTACAATCTTGTATCATCACTTCATGACATCATAAAAATCCAAATGTCTGTCATCATAATTATACTGTTTCACCTTTTATCATTGTCTGAAAATGGAAGTATAATACAAAAGAGAAAAATTGAAGTACCATTTTTTTAGTTGCAAGTGAGAAATAT 2139 0.4483 MAAALECWSSRATTATEDDMVEQVLMRSQHRSEGTTVSSTPKDPSSVPVHKKLQKLTRNVSEAIASFRNSLNLDSPPSSKADASFRKLAWGSVVRNLTQLYPGSQLPEKLMSNIRKHYDSLPLSYAQAEFDMKDVFLHIKLMEQASESDQPAILIQEECDDEVQGSALRLTFACNSPISWPAMSGALDSSSICCKRMQIFEKKGFTLGVVLLVVQSGHDKLVRTRVENALKFAMKRPKSGAVKLPFGLCGCQEENSKGRELVEIEEETGDGYRGKEFENSSQRIQLQVPLPSSSFVVSVDEWQTIKSGGDGIEKWLLNSDSVDFVEQIGPNSYKGVYMGKRVGIEKLKGCDKGNSYEFELHKGLLELMTCGHRNILQFCGICVDDNHGLCVVTKFMEGGSVHDLMLKNKKLQNKDIVRIAVDVAEGIKFMNDHGVAYRDLNTQRILLDRHGNACLGDMGIVTACKSVGEAMEYETDGYRWLAPEMIAGDPENVTETWMSNVYSFGMVIWEMVTGEAAYSSFSPVQAAVGIAACGLRPEIPKDCQQTLKFIMTKCWNNNPSKRPQFSEILAILLRPNNR 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01646 578 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 103 572 - -
Pste8g01646 578 Pfam Protein tyrosine and serine/threonine kinase 360 571 IPR001245 GO:0004672|GO:0006468
Pste8g01646 578 SUPERFAMILY Protein kinase-like (PK-like) 308 572 IPR011009 -
Pste8g01646 578 MobiDBLite consensus disorder prediction 27 49 - -
Pste8g01646 578 PRINTS Tyrosine kinase catalytic domain signature 543 565 IPR001245 GO:0004672|GO:0006468
Pste8g01646 578 PRINTS Tyrosine kinase catalytic domain signature 499 521 IPR001245 GO:0004672|GO:0006468
Pste8g01646 578 PRINTS Tyrosine kinase catalytic domain signature 429 447 IPR001245 GO:0004672|GO:0006468
Pste8g01646 578 PRINTS Tyrosine kinase catalytic domain signature 393 406 IPR001245 GO:0004672|GO:0006468
Pste8g01646 578 ProSiteProfiles Protein kinase domain profile. 322 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01646 578 MobiDBLite consensus disorder prediction 28 45 - -
Pste8g01646 578 Gene3D Transferase(Phosphotransferase) domain 1 315 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01646 Pste-Chr8 10289045 10293790 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01646 305 572 MAP Kinase Kinase Kinase AT2G17700 33.818 1.19e-52 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Pste8g01646 PK_Tyr_Ser-Thr 1.9e-41 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01646 8 10289045 10293790 Pste8g01646 8 10289045 10293790 ECH