Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01640 ATGGCGGTTTGCTATTGTGCACAAGGTCTTTGGCTGCAGCAATATAACAAAAATGATAAAGTTCAATTTAATATCCAAGCTAAAGAACTTCATATTGGCAAGGATCTTCCAGTTGAGCAAAGAGCAGATGCAGTGAGCAGTTTATTTTATGAGGGAAACGCAAGAATTAGAAACCCTGTGTATGGTTGTGTTGGAATCATATCTCACCTGGAAAGTCCAGTTTGTGAGTTACAAAAGCAGCTTGCAGTAGCTCAGGCAGAGATTATCAGGATGCGAATGTAG 282 0.4007 MAVCYCAQGLWLQQYNKNDKVQFNIQAKELHIGKDLPVEQRADAVSSLFYEGNARIRNPVYGCVGIISHLESPVCELQKQLAVAQAEIIRMRM 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01640 93 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 34 92 - -
Pste8g01640 93 Pfam Lateral organ boundaries (LOB) domain 32 85 IPR004883 -
Pste8g01640 93 ProSiteProfiles LOB domain profile. 1 88 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01640 Pste-Chr8 10189425 10189882 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01640 34 93 AS2 family AT2G30130 65.000 1.01e-21 82.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pste8g01640 LOB 3e-14 No_clan