Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01624 ATGGCTTCTTCTTCTGGTAGTTTAGACACCTCTGCAACTGCTAACTCCTTTGCCAACTTCACCTTCTCCACACACCCTTTCATGACCACTTCCTTCTCTGACCTTCTTGCTTCTCCCACAGAGAACAAGACTCAGGCTGGTTTGTCTGAGAGAACTGTCTCTGGCGTGCCAAAATTCAAGTCCACACCACCACCCTCTTTGCCTCTCTCTCCTCCTCCCATTTCTCCTTCTTCCTACTTTGCTATTCCTCCCGGTTTGAGCCCCACTGAGCTTCTTGATTCCCCGATTCTGCCATCTCCAACCACCGGAGCATTTGCTGCTCAGAGCTTCAATTGGAAGAGCAGTTCAGGGGGGAACCAGCAAATTGTTAAAGAAGAAGACAAAAGCTTCTCGAACTTCTCTTTCCAAACCCAACCAGGACCTTCTGTGTCATCCGCAGCAACATTTCAATCTTCAAATGTTACAGCTCAAACACAGCAACAGCCATGGAACTTTCGGGAGTCCACAAAGCAAGATAGTTTTTCTTCTGGAAAGAGTATGATGAAAACTGAAAACACTTCTTCCATGCAGAGTTTTTCCCCTGAAATTGCTAGTGTTCAAACTAACCATAGCAATGGGTTCCAAACGGATTACAGCAATTACCCCCAACAGGCTCAGACCTTAAGCAGAAGGTCAGATGATGGGTACAATTGGAGGAAATATGGCCAAAAGCAAGTGAAAGGAAGTGAAAATCCAAGAAGTTATTACAAATGCACATACCCCAATTGCCCTACAAAGAAGAAGGTTGAGAGGTCTTTAGATGGACAAATTACTGAGATAGTTTATAAGGGTTCTCATAACCATCCCAAGCCTCAATCTACTAGGAGAAACTCATCATCTTCCTCTTCTCTTGCAATCCCTCATTCAAATCCCATGAGCACTGAAATCCCAGATCAGTCATATGCCACACATGGCAGTGGACAAATGGATTCAGCTGCCACCCCAGATAACTCGTCAATATCAATTGGGGATGATGATTTTGAGCAGAGTTCCCAAAAGTGTAAATCAGGAGGAGACGAGTTTGATGAAGATGAACCTGACGCCAAAAGATGGAAAATTGAAGGTGAAAATGAGGGTCTGTCGGCCCCTGGAAGTAGAACGGTGAGAGAGCCTAGAGTTGTAGTTCAGACAACCAGTGACATTGATATTCTTGATGATGGGTATAGATGGAGAAAATACGGGCAGAAAGTAGTGAAGGGAAATCCAAATCCAAGGAGTTACTACAAGTGTACACACCCGGGATGTCCAGTGAGAAAGCACGTGGAAAGAGCCTCACATGACCTAAGGGCTGTGATCACAACCTATGAAGGAAAGCACAACCATGATGTACCTGCAGCCCGTGGCAGTGGAAGCCATTCTGTTAACAGACCATTGCCAAACAATGCTGCAAACCCCAGCACTGCAGCCACTGCCATAAGACCCATGCCAGTGATTCACCACACAGACAATTCCCATCAGAGCCAAAGACCACAAGCACCGCCAGAAGGGCAATCACCCTTCACCCTAGAGATGCTACAAAGTCCAGGAAGTTTTGGGTTCGCTGGTTTTGGGAATCCAATGGGGTCTTTTATTAATCAGCAGCAACTATCTGACAATATTTTCTCTTCCAGAGCCAAGGAGGAGCCAAGAGATGACATTCACAGGATTGGTATATCAAAGATGGGTTCTGGCTTGTTTGGTGAGTTAGCTGGTCAAGGTCAACTTTGGTTGTTCCTTAAACAAATGGACGCTTCCAGCCAGGTTGCAACCCTATCTATCCAAGTGGGTAGTCATAAATTTTGTCAGTACAGAGGAAATGACAGGATTGCCCCTGAGAGGGATTTTGTAGTACATGGATTGAAAGCCAAGTGCTGGGAAGGCGCAGTTATGCAAAGGGTATTCACATTTTTGTTTAATGAGAGTTGTGTTGATGTGGGACAGGAGGGAATGAGACATTTACGTGATGCACACGCTTCCCTTAACCTCTTAAGCCAAATTCTGCAGATTCATTTGTCCTAG 2037 0.4536 MASSSGSLDTSATANSFANFTFSTHPFMTTSFSDLLASPTENKTQAGLSERTVSGVPKFKSTPPPSLPLSPPPISPSSYFAIPPGLSPTELLDSPILPSPTTGAFAAQSFNWKSSSGGNQQIVKEEDKSFSNFSFQTQPGPSVSSAATFQSSNVTAQTQQQPWNFRESTKQDSFSSGKSMMKTENTSSMQSFSPEIASVQTNHSNGFQTDYSNYPQQAQTLSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSLDGQITEIVYKGSHNHPKPQSTRRNSSSSSSLAIPHSNPMSTEIPDQSYATHGSGQMDSAATPDNSSISIGDDDFEQSSQKCKSGGDEFDEDEPDAKRWKIEGENEGLSAPGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGSHSVNRPLPNNAANPSTAATAIRPMPVIHHTDNSHQSQRPQAPPEGQSPFTLEMLQSPGSFGFAGFGNPMGSFINQQQLSDNIFSSRAKEEPRDDIHRIGISKMGSGLFGELAGQGQLWLFLKQMDASSQVATLSIQVGSHKFCQYRGNDRIAPERDFVVHGLKAKCWEGAVMQRVFTFLFNESCVDVGQEGMRHLRDAHASLNLLSQILQIHLS 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01624 678 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 94 492 IPR044810 GO:0003700
Pste8g01624 678 MobiDBLite consensus disorder prediction 41 72 - -
Pste8g01624 678 Gene3D WRKY domain 384 450 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste8g01624 678 ProSiteProfiles WRKY domain profile. 392 457 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste8g01624 678 MobiDBLite consensus disorder prediction 452 479 - -
Pste8g01624 678 FunFam WRKY transcription factor 216 285 - -
Pste8g01624 678 SUPERFAMILY WRKY DNA-binding domain 224 284 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste8g01624 678 MobiDBLite consensus disorder prediction 280 340 - -
Pste8g01624 678 SMART WRKY_cls 397 456 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste8g01624 678 SMART WRKY_cls 225 283 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste8g01624 678 MobiDBLite consensus disorder prediction 341 360 - -
Pste8g01624 678 Gene3D WRKY domain 212 285 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste8g01624 678 MobiDBLite consensus disorder prediction 141 229 - -
Pste8g01624 678 MobiDBLite consensus disorder prediction 275 360 - -
Pste8g01624 678 Pfam WRKY DNA -binding domain 398 454 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste8g01624 678 Pfam WRKY DNA -binding domain 226 282 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste8g01624 678 MobiDBLite consensus disorder prediction 141 225 - -
Pste8g01624 678 SUPERFAMILY WRKY DNA-binding domain 389 457 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste8g01624 678 ProSiteProfiles WRKY domain profile. 226 284 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste8g01624 678 FunFam WRKY transcription factor 33 384 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01624 Pste-Chr8 9915626 9919256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01624 1 558 WRKY Transcription Factor Family AT2G38470 44.655 1.04e-115 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste8g01624 WRKY 2e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g01726 7 16067125 16070284 Pste8g01624 8 9915626 9919256 PCT