Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01616 AATAATGTGAGGTTCCATACTCCAAACCTAGCCAGCAATTCAATGATCACTGGGCAAATTATGAACTCCCACGATGGTGCCAAAGTGCTTCAAGCTCAAACCCACGTATGGAATCACAATCTCAGCTTCATAAAGTCCATGTCCCTTAAATGCGTAGTTGACTTAGGCATACCAGATCACATACATAACTATGGAAAGCCCATGCCACTTTCAAACCTCATTGCTTCACTACAAATCCATCCATCCAAAACCCAATGCATCCCTCGCTTGATGCGAATCATGACTCATTCTGGCTTTTTCTCTCAACATAATGTCACCGAGAATGAGCTTGATGTGGAATATGCTCTAACAGATGCATCTAAACTTCTGCTTAAGAACCATCCGATGAGTTTGGCACCTTTATTGCATTTCAACCTTGATCCAATTATGACAAAGCCATGGCATGAACTTTCTACTTGGTTCAAAAATGGTGATGTTACACCTTTTGAAACGGCACATGGAATGTTGTTGTGGGATTATGCTGGCTATGAGCCCAAACTTAATCACTTATTCAATGATGCCATGGAGACAGACACTCAACTGATCACTAGTGTGGTGATTGAGAAGTGTAAAGGAGTGTTCATGGGATTGGAGTCATTGGTTGATGTTGGGGGAGGCACAGGGACCATGACAAAGGCCATTGCTAAATCATTCCCACAAATGCAATGCATTGTATTAGATCTTCCGCATGTTGTTGCTGGTTTGCAAGGAAGTGAGAACGTAAAATACGTTAGAGGGGACATGTTTGAGACGATTCCTCCAGCTGATGCCATTTTGTTGAAGTGGATATTGCATGACTGGAATGATGATGAATGCATGAAGATACTAAAGAAGTGTAAGGAAGCAATCACGAGGGAAGGTAAAAAAGGGAAGGTGATTATCATAGACATGGTGATCGATGATGAAAAGAGAGATGACGAATCAGTGCAAACTCAACTCTTTTTGGATATGTTGATGATGGTGTTGGTCACTGGAAAAGAGAGAAACAAGAAAGAATGGATTAAGTTGATTTACTCTGCAGGTTTCAGTGACTATAAGATAACCCCCGTCTTGGGATTAAGGTCTCTCATTGAGATCTATCCATATATGAAATTAAAATTGATGCGTATAAAAATTAACAAAAAAAGTGATCGAACCATGCTGCCAAACTACTTAGAGCTCAAACCCACATATGGAATCACATATTTAGCTTCATCAAGTCCATTTCCCTTGGGCATACCAGATATCATACATAACTATGGCCAACCCATGCCACTTTCAAACCTCATTGTTTCACTACCAATCCATCCATCCAGAGCCCGATGCATTTATCGTTTGATGCGAATCATGATCCATTCCGGTTTTTTCTCTCAACATAATGTCACCCAGAATGAACTAGAAGGGGAGTATGTTCTAGCCGATGCATCCGTACTACTGCTTAAGAACCATCGAATGAGTCATGCCAACCTTGATTCAATTACCACAATGCCATGGCTTCAATTTTCTAATTGGTTCAAAACTACTGATCGATCACCATTTGAAACAGCACACGGGATGCTGTTATGGGATTATGCGGGCCACGAGCCAAAAGCTAATCAATCACTTATTCAATTGAGAAGTGCAAGGGAGTGTTCATGGGATTGGAGTCATTGGTTGATGTTGGGGGTGGCACAGGGACCCTGGCAAAGGCCATTGCTATATCATTCCCACATATGCAACTCATTGTATTTGATCTCCCACATGTTGTTAATGGCTTGCAAGCAACTGAGAATCTTAAATATTTCGGAGGGGACATGTTTCAGGCGATTCCTCCAGCCGATGCTATTTTATTTAAGGAGGCAATCACTAGGGAAGGTAAAAAAGGGAAGCTTGACCATTATTAACTTGGTGATGGATGATGTGAAGAGAGACTATGATTCAATGGAAGCACAACTCTTGTTTGATATGCAGATGAGTGTTGTTCATCGGAAAAGAGAGAAACAAGAAAGAATGGGTTTCAAAGACCTTGAGATAATTCCAGTTTTGGGCTTAAGGTCTCTAATTGAAATCTATCGTTAG 2076 0.4099 NNVRFHTPNLASNSMITGQIMNSHDGAKVLQAQTHVWNHNLSFIKSMSLKCVVDLGIPDHIHNYGKPMPLSNLIASLQIHPSKTQCIPRLMRIMTHSGFFSQHNVTENELDVEYALTDASKLLLKNHPMSLAPLLHFNLDPIMTKPWHELSTWFKNGDVTPFETAHGMLLWDYAGYEPKLNHLFNDAMETDTQLITSVVIEKCKGVFMGLESLVDVGGGTGTMTKAIAKSFPQMQCIVLDLPHVVAGLQGSENVKYVRGDMFETIPPADAILLKWILHDWNDDECMKILKKCKEAITREGKKGKVIIIDMVIDDEKRDDESVQTQLFLDMLMMVLVTGKERNKKEWIKLIYSAGFSDYKITPVLGLRSLIEIYPYMKLKLMRIKINKKSDRTMLPNYLELKPTYGITYLASSSPFPLGIPDIIHNYGQPMPLSNLIVSLPIHPSRARCIYRLMRIMIHSGFFSQHNVTQNELEGEYVLADASVLLLKNHRMSHANLDSITTMPWLQFSNWFKTTDRSPFETAHGMLLWDYAGHEPKANQSLIQLRSARECSWDWSHWLMLGVAQGPWQRPLLYHSHICNSLYLISHMLLMACKQLRILNISEGTCFRRFLQPMLFYLRRQSLGKVKKGSLTIINLVMDDVKRDYDSMEAQLLFDMQMSVVHRKREKQERMGFKDLEIIPVLGLRSLIEIYR 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01616 691 FunFam O-methyltransferase ZRP4 125 374 - -
Pste8g01616 691 FunFam Coniferyl alcohol 9-O-methyltransferase 19 123 - -
Pste8g01616 691 Gene3D - 19 123 IPR036388 -
Pste8g01616 691 Gene3D - 408 485 IPR036388 -
Pste8g01616 691 Pfam O-methyltransferase domain 147 356 IPR001077 GO:0008171
Pste8g01616 691 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 128 372 IPR029063 -
Pste8g01616 691 SUPERFAMILY "Winged helix" DNA-binding domain 416 489 IPR036390 -
Pste8g01616 691 CDD AdoMet_MTases 213 308 - -
Pste8g01616 691 Gene3D Vaccinia Virus protein VP39 124 374 IPR029063 -
Pste8g01616 691 PANTHER O-METHYLTRANSFERASE 415 539 IPR016461 GO:0008168
Pste8g01616 691 Pfam Dimerisation domain 47 94 IPR012967 GO:0046983
Pste8g01616 691 Pfam Dimerisation domain 417 456 IPR012967 GO:0046983
Pste8g01616 691 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 37 374 IPR016461 GO:0008168
Pste8g01616 691 SUPERFAMILY "Winged helix" DNA-binding domain 28 128 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01616 Pste-Chr8 9850359 9857963 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01616 47 360 Monolignol Biosynthesis Gene Families AT5G54160 32.602 1.31e-50 178