Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01613 AGCAATTTGAATTATCTCACCAGCTTCGATTCATCGCCATGCTTTCAACTACCTTTCAATGGTTAAGTCTTGTGGGCATCCTTTGGCTCCAATCCATAAATGGGACAAACACCAATTTTCCTGCTTACTCTTCTCAGCTGAAGGACCTTCTTTCAATCTCCCAATTGCAGCTCAACAACCTTGCTTTTGCCTCTGATGCAGGCAAACTTTTTGGCTTTTTTTCTGGCATAGCTGCTGTTTACCTCCCCCTTTGGCTTGTCCTCATCATAGGTTCCACTCTTGGCCTCATTGGTTATGGGGTGCAATATCTCTTCATCACAAACCAGATCCCCTCTCCCTCCTATTGGCATGTCTTCTTACTAACCGTTTTAGCAGGGAACAGCATTTGTTGGATTAACACTGTGTGCTATGTGATCACAATTAGGAACTTTCCATCTCATCGCCAACTTGCTGTGGGGTTAACAACTAGTTACCAAGGTCTGAGTGCTAAGATTTATACCAGCATTGTTGATGCTATTTCTGGACACAGAAGGGCTGAAAAATTTTTATTTCTTAACTCACTCTTACCTGTGGTAGTTGGCCTAATAGCAGCTCCTGTAGTTAGAGAAATTGAAGTCGCAAGGCCTGAACATATGAGTGTTGGATTTGTTTTTATGTTTGCTATTACAATTGCAACTGGAATATATGCTGTGGTGAGCAGCTTGCAATTTGTCTCAACCAGAATGTCTCCACTTGGTAACCTTGTCGGTGTTATAGTGACCCTTTTATTCCCTCTTTTGGTTCCACTTTCCATGAAGATCCATGAACTGGTAGGGTCATGGCACAAAAGTAGAGAAAAAAATAGAGTCTATCATTTTACTACTGAGGAGAGTCGTAATGAAGAGAGTAAAGAGAATGAGGTGAAAGAGGGTGAAGATGGCATAGAAGTTCATCAAGGTGTAGGTATAAGAGAAGAAATAGGAGTAAAAGTGATGCTGAGAAGAATAGATTTCTGGTTATATTTCTTTGTCTATTTATTCGGTGCAACGCTCGGTTTAGTATTTCTTAATAACTTGGGACAAATAGCTGAATCCCGAGGTTACTCTAGTACTTCATCATTGGTGTCTTTGTCCTCTTCTTTTGGATTCTTTGGCCGTCTCATGCCATCTATAGTGGACTGCTTTTACAGGGGTAAGCGTCCAATATCAAAACCAGCTTCTATGGTGGCATTAATGGCTCCAACAGCAGGGGCATTTTTCTTACTTCTCAACAAAACTCACCTTGCCCTCTACGTTAGCACAGCCATAATTGGTGTTTGTACTGGAGCAATCACATCCATTTCTGTGTCCACCACCACTGAATTATTTGGAACCCAGAATTTCTCTGTGAACCATAATGTGGTGGTGGCCAACATTCCAGTGGGGTCCTTTCTCTTTGGTTACTTGGCTGCCCTTGTTTACCATAAGGCAGGGAATGAACATGGAAAATGCACGGGCATGGAATGCTACAGAAACACTTTCATCATATGGGGTTCCCTCTGTTTCTTTGGCACCTTTTTGGCTTTTCTTCTACATGCTAGGACTCGCAAGTTTTACTCACATTTATAGGACACCTTTTATTTTATTATAGGCCATGTAACCAATATTCCCAACACCTAAGAGTGCACATG 1648 0.4169 MLSTTFQWLSLVGILWLQSINGTNTNFPAYSSQLKDLLSISQLQLNNLAFASDAGKLFGFFSGIAAVYLPLWLVLIIGSTLGLIGYGVQYLFITNQIPSPSYWHVFLLTVLAGNSICWINTVCYVITIRNFPSHRQLAVGLTTSYQGLSAKIYTSIVDAISGHRRAEKFLFLNSLLPVVVGLIAAPVVREIEVARPEHMSVGFVFMFAITIATGIYAVVSSLQFVSTRMSPLGNLVGVIVTLLFPLLVPLSMKIHELVGSWHKSREKNRVYHFTTEESRNEESKENEVKEGEDGIEVHQGVGIREEIGVKVMLRRIDFWLYFFVYLFGATLGLVFLNNLGQIAESRGYSSTSSLVSLSSSFGFFGRLMPSIVDCFYRGKRPISKPASMVALMAPTAGAFFLLLNKTHLALYVSTAIIGVCTGAITSISVSTTTELFGTQNFSVNHNVVVANIPVGSFLFGYLAALVYHKAGNEHGKCTGMECYRNTFIIWGSLCFFGTFLAFLLHARTRKFYSHL 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01613 515 Gene3D MFS general substrate transporter like domains 7 510 IPR036259 -
Pste8g01613 515 Pfam Nodulin-like 7 250 IPR010658 -
Pste8g01613 515 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 513 - -
Pste8g01613 515 SUPERFAMILY MFS general substrate transporter 202 510 IPR036259 -
Pste8g01613 515 CDD MFS_Mch1p_like 7 498 - -
Pste8g01613 515 SUPERFAMILY MFS general substrate transporter 5 192 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01613 Pste-Chr8 9781171 9783010 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01613 8 514 Nodulin-like Gene Family AT2G30300 48.099 1.37e-151 441
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01613 8 9781171 9783010 Pste8g01613 8 9781171 9783010 ECH
Pste7g01737 7 16170758 16172667 Pste8g01613 8 9781171 9783010 PCT