Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01608 CTCAAACACAATGGATTCTCATCCTCAAACTTTCCTTGTGCTTGTTATGGTCACTTTAGCAACATTTATGATCCCTACTTTTGCTCAGCTCACCCCTACTTTCCATGACAATCTTTGTCCTAGGGCTTTGCCCATCATTAAGTCTGTTGTTAAGCAAGCAATTATTCGTGAAAAACGCATAGGAGCATCCTTGTTGCGTTTGCATTTCCATGATTGCTTTGTTAATGGATGTGATGGATCAGTACTGCTTGATGACACCCCTTTCTTCTTGGGAGAGAAGACTGGACTTCCAAACATTAATTCACTAAGAGGGTTTGAGGTTGTTGATGAAATCAAAGCAGCAGTTGACAAAGCTTGCAATGGTCCTGTAGTATCATGTGCAGATATCTTAATTGTAGCAGCTCGTGACTCTGTAGCCATAGTGATTGGGGGTCCACAGTATTGGTACCAAGTGTTAGTTGGCAGAAGAGATGCAAGATATGCAAGCAGAGATGCAGCAAATACCAATCTTCCTCCTCCATTCTTCCGCTTCCCACAGCTTCTTGCTAGTTTCCAATCTCATGGTCTGGACCTCAAGGATCTAGTGGTCCTCTCTGGAGCTCACCCCATTGGATTAGCAAAGTGCGTTAACTTCAAAGACAGGATCTTCAATGACACCAACATAAACCCCAAATTTGGTGCTTCTTTGCATCACTCATGCCCTCCAAGTGGTGGAGACACTGCTTTAGCACCATTGGATGCTACTCCTTCACAATTTGACACCACATACTACAAGGCTTTGTTGCATAAAAAGGGTCTCCTCCATTCTGATCAAGAGCTATTCAAGGGTGATGGTGGTGAAAGTGATATATTGGTGCAGCTATATAACAATGACCCTTATGCCTTTGCCAAAGACTTTGGGCTTTCCATGGTTAAGTTGGGTAACTTCAAGCCTCTTACTGGGAATGAGGGAGAGATCAGGTATAATAGTAGAAAAATCAATTAC 985 0.4284 MDSHPQTFLVLVMVTLATFMIPTFAQLTPTFHDNLCPRALPIIKSVVKQAIIREKRIGASLLRLHFHDCFVNGCDGSVLLDDTPFFLGEKTGLPNINSLRGFEVVDEIKAAVDKACNGPVVSCADILIVAARDSVAIVIGGPQYWYQVLVGRRDARYASRDAANTNLPPPFFRFPQLLASFQSHGLDLKDLVVLSGAHPIGLAKCVNFKDRIFNDTNINPKFGASLHHSCPPSGGDTALAPLDATPSQFDTTYYKALLHKKGLLHSDQELFKGDGGESDILVQLYNNDPYAFAKDFGLSMVKLGNFKPLTGNEGEIRYNSRKINY 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01608 325 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste8g01608 325 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste8g01608 325 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste8g01608 325 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste8g01608 325 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste8g01608 325 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste8g01608 325 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste8g01608 325 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste8g01608 325 SUPERFAMILY Heme-dependent peroxidases 26 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pste8g01608 325 PANTHER PEROXIDASE 72-RELATED 24 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste8g01608 325 FunFam Peroxidase 168 303 - -
Pste8g01608 325 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Pste8g01608 325 Pfam Peroxidase 44 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste8g01608 325 Gene3D - 31 324 - -
Pste8g01608 325 CDD secretory_peroxidase 26 323 IPR033905 GO:0004601|GO:0042744
Pste8g01608 325 ProSiteProfiles Plant heme peroxidase family profile. 26 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste8g01608 325 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste8g01608 325 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste8g01608 325 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste8g01608 325 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste8g01608 325 Gene3D Peroxidase, domain 2 168 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01608 Pste-Chr8 9677819 9680132 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01608 25 317 Peroxidase AT5G05340 54.054 1.31e-112 328