Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01603 AGTCAATAGCCAGTTTTCCAAAAGAACTAACACCCTTCCCTCTCTCAAGACACCACTTAGATCAAGACAATCAAAAGGCATGTTTGGACATCCAGAGACAGATAGATTAGATGAGATAACAAAGGTGAGAGCAGAGGGAGAAGCATCTTCTCAAATGGGAAGGAAGCATTTCTATGGTCCAACTCCTGTGAATACCTTAAACACAGTAACCCCTTGTGCTGCATGCAAGCTTTTGAGAAGAAGGTGTGCTGAAGAATGCCCTTTCTCTCCTTATTTTTCACCACATGAGCCTCAAAAGTTTGCAGCCGTTCACAAAGTGTTTGGTGCGAGCAATGTCTCCAAGATGCTAATGGAGGTACCAGAGGGCCAAAGAGCTGATGCAGCAAATAGCCTTGTTTACGAAGCTAACCTGAGACTAAGAGATCCTGTGTATGGATGCATGGGTGCAATATCAACTTTGCAGCAACAAGTTCAATCTTTACAAGCAGAACTAAATGCAATAAGGACAGAGATACTAAAATACAAATATAGAGAGGCTGCAAGTATCATTTCTTCTCATCATGCTGCTTTAGTTTCTTCTGCTGATGCAATATCTGCAGCAATTCCTGCAGACTCACAAGGTCTTTCTCAACCTCCTCCTCCTCTACAAAAACCATTGCCTTCTCCTCCAACAAAACCATTACCTTCACCTTCTATTATCCTTTCATCCTTGTCTTCATCTTCGGCTTCTTCTGTGTACACTCCTCCTAAAAGCTCAATGAGCCTCGGATCCATTTCCAGCACTGAAAATGTCCCATACTTTGTTTAGGTCTATTTGTTTACTATTCATTTGATGTAGGAATAATCATGCTTTTCTCATCAGAGTAGAATGTATCACTTGGTCATCTAGAGCTAATTATGGGAAAGGGAAA 911 0.4138 MFGHPETDRLDEITKVRAEGEASSQMGRKHFYGPTPVNTLNTVTPCAACKLLRRRCAEECPFSPYFSPHEPQKFAAVHKVFGASNVSKMLMEVPEGQRADAANSLVYEANLRLRDPVYGCMGAISTLQQQVQSLQAELNAIRTEILKYKYREAASIISSHHAALVSSADAISAAIPADSQGLSQPPPPLQKPLPSPPTKPLPSPSIILSSLSSSSASSVYTPPKSSMSLGSISSTENVPYFV 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01603 242 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 41 195 - -
Pste8g01603 242 MobiDBLite consensus disorder prediction 177 242 - -
Pste8g01603 242 ProSiteProfiles LOB domain profile. 44 145 IPR004883 -
Pste8g01603 242 MobiDBLite consensus disorder prediction 181 203 - -
Pste8g01603 242 Pfam Lateral organ boundaries (LOB) domain 45 141 IPR004883 -
Pste8g01603 242 Coils Coil 124 144 - -
Pste8g01603 242 MobiDBLite consensus disorder prediction 204 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01603 Pste-Chr8 9594125 9595644 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01603 26 158 AS2 family AT2G30340 79.104 4.63e-74 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pste8g01603 LOB 8e-41 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01603 8 9594125 9595644 Pste8g01603 8 9594125 9595644 ECH