Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01601 ATGCCGGAAGTGGACCACGCCGCGGGGGAGAACACCTCCCTCTTCGGAAAGTACGAGGTCGGGAGGCTCCTAGGATGTGGAGCGTTCGCCAAGGTGTACCACGCGCGCAACATCGAGACGGGGCAGAGCGTGGCCGTGAAAGTCTTAAGCAAGAAGAAACTAACCGCATCGGGGTTGGCCTCCAACGTGAAACGCGAGATCGCCATCATGAGACGCCTTCACCACCCCAACATCGTCAAACTCCACGAAATTCTGGCCACCAAGACCAAAATCTATTTCGTCTTGGAATACGCCAAAGGTGGTGAACTTTTTGCGAGAATCTCCAAGGGCAGATTCAGCGAAGATCTCGCCAGGCGATATTTTCAGCAGCTCATCTCCGCCGTCGGGTACTGCCACGCGCGCGGCGTTTTCCACCGCGACTTGAAGCCGGAGAATCTGCTTCTGGACGAGAACGGGATTCTTAAAGTCTCCGACTTTGGACTCAGCGCGGTGAAGGAACAGCTTGGGGTGGATGGGTTGTTTCACACGTTGTGCGGTACTCCTGCTTACGTGGCACCGGAGATTTTGGCGAAGAAGGGTTACCACGGTGCAAAGGTCGATGTTTGGTCTTGTGGGATTATCCTCTTTGTTCTTGTAGCTGGGTATCTTCCATTTAATGATCCGAATTTGATGGTGATGTATAAGAAGATTTATAAGGGGGATTTTCGGTGTCCGAGGTGGTTTTCGATGGATCTAAGGAGGTTTTTGGCAAGGTTGTTGGATACGAATCCCGATACGAGGATCACAGTTGATGAGATTTTGAGGGAACCATGGTTTAAAAAGGGGTATAAGGAGGTTAAGTTTGGGGATTTGGGTTTGGAGTGGAAGAGTGAGGGGGAGGAAGTGAAGGATCTGAATGCTTTCGATATTATTTCATTTTCTTCAGGGTTGAATCTCTCGGGCTTGTTTCATTCGTCTTTTGAAGTGGAAGATGGGGAGAGGCTTTTGCTAAAGGGGTCGCCGGAAAAGGTAGTCGAGAAGGTAGTTGCAGCGGCGGAGACGGTGGAGGGAGTAGTTGTGCGGAGGAGGAAGGAATGTGGGGTTGAGTTGGAGGGGTGTGCTGGTAATTTCGCTGCTTTGGTGGAAGTTTACCGGTTACCGGGGGAACTGGTTGTGGTTGAGGTTAGAAGGAGAGAGGGGGAAGGTGGGGCTTTTAGGGATGTGTGGAGGAATAAGCTGAGGCCGCAGCTCTGTGCTGCAAGTAGCAGTACTACTACCTCGGATCGTCAGGGGCAGCCGGTTGCCGCCGGTGAATCATGA 1299 0.5204 MPEVDHAAGENTSLFGKYEVGRLLGCGAFAKVYHARNIETGQSVAVKVLSKKKLTASGLASNVKREIAIMRRLHHPNIVKLHEILATKTKIYFVLEYAKGGELFARISKGRFSEDLARRYFQQLISAVGYCHARGVFHRDLKPENLLLDENGILKVSDFGLSAVKEQLGVDGLFHTLCGTPAYVAPEILAKKGYHGAKVDVWSCGIILFVLVAGYLPFNDPNLMVMYKKIYKGDFRCPRWFSMDLRRFLARLLDTNPDTRITVDEILREPWFKKGYKEVKFGDLGLEWKSEGEEVKDLNAFDIISFSSGLNLSGLFHSSFEVEDGERLLLKGSPEKVVEKVVAAAETVEGVVVRRRKECGVELEGCAGNFAALVEVYRLPGELVVVEVRRREGEGGAFRDVWRNKLRPQLCAASSSTTTSDRQGQPVAAGES 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01601 432 Pfam Protein kinase domain 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01601 432 ProSiteProfiles Protein kinase domain profile. 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01601 432 SUPERFAMILY Protein kinase-like (PK-like) 15 279 IPR011009 -
Pste8g01601 432 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Pste8g01601 432 SMART serkin_6 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01601 432 FunFam Non-specific serine/threonine protein kinase 8 300 - -
Pste8g01601 432 CDD CIPK_C 299 411 - -
Pste8g01601 432 Gene3D Transferase(Phosphotransferase) domain 1 8 298 - -
Pste8g01601 432 FunFam Non-specific serine/threonine protein kinase 9 97 - -
Pste8g01601 432 Gene3D Kinase associated domain 1, KA1 299 413 - -
Pste8g01601 432 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 12 390 - -
Pste8g01601 432 MobiDBLite consensus disorder prediction 413 432 - -
Pste8g01601 432 ProSiteProfiles NAF domain profile. 293 317 IPR018451 GO:0007165
Pste8g01601 432 Pfam NAF domain 297 348 IPR004041 GO:0007165
Pste8g01601 432 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01601 Pste-Chr8 9518620 9519918 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01601 1 420 CBL-interacting serine-threonine protein kinases AT2G30360 63.908 0.0 542
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pste8g01601 Pkinase 6.1e-72 CL0016