Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01593 TACCTAGTTGGTACATATAAACTCGTAATTAGTCACTCTGTTTTCCTTAGATTTGCCTATGCCAATTCAATCTTCTGTGATAAATTTCACCACCATCAAACTGGTTGGAGAGAATGCAGCTTTTGCAACAAGCGTCTCCATTGTGGATGCATAGTATCAAGGTCTTTGTTTCAGTACCTTGATTTTGGCGGTATAGGTTGTGTTACTTGTGTGAAGACTTACCTACTTTCTTTGATACAGGATCTTGAAACCCCTAATCAGCCGGTTAGATCAATAAAAAATAATCCAAGTGATCATCATATAGAACATATTGATGGTAGACTATTGATGGATGATGTTGGCAAAGGAAAATTTATTCAATCATGCAAAATTGATAAGACTAGTGAATCCCACCATTGGCATCAAGATGAGGGAAATGACATAGATTCATACATTGGTCCAAACAATCAAGGAGATAGAAGATTATCAAATTTGGTGAAACCGTGTAGGCATTCATTGGCTTTTCCTACATTAAAAAATAATAGACCAACATGGGAGACCAAAACTATGCATAATTCAAGTTCATTGAATATTTCACTAGGAACTTCATCAGGAAATTCTATCTTCCCTTTTGCTTTAAATGTTGTAGAAAGAAGACTTGAGGGCAAATCATCATCTTCTCCCTTTCATCAAGGGCAAATATTTCTCCCCACATTTCCTAAACCATCATTAAGTGAGATAACCATGAATATGGAAACAAGTAAAGACATGATTTCTCATGAACGTGTTGCTCGACCACCTACTGATGGGAAAGGCAAGAATTTTTTAAAGTCTACTATAGTGCCATTATTTGAGAAGGTATTAAGTGCAAGTGATGCTGGTAGAATTGGCCGTATTGTTCTCCCAAAATCTTGTGCTGAGGCTTACTTTCCTCCTATTTCACAGCCAGAAGGTCTACCTTTGCAAATCAAAGATATGAAAGGAAAAGAGTGGATATTTCAGTTTAGATTTTGGCCTAATAATAATAGTAGGATGTATGTATTGGAAGGAGTAACCCCGTGCATGCAAGAGTTACAATTAAATGCTGGTGACATTGTAACATTTAGTCGGATAGATCCTGAAGGCAAATTTCTCATGGGTTTCAGAAGGGCATCAAATTCTATAAATACTCAGGATGTCTCTACTTTTGCTTATTCCAATGGTTTTTTAACAAAGGAAACAACCATTTCTACTGAAGGTAAAAATATGGACTCAAGAAATAGTAACCCTGATATTTTCCTAACAAGGAAAGAGAATTATAAACATTGCTTAAACAGAAAGAATTGTCAAATGGTAAACAACAATTTGTTGCGACAACCAATTTCAATTTTGGAGAAAACTCAAAATATTGGACCTAAGAGTAAAAGGTTGCTCATAGATAAAGAAGATGCTATGGAGTTGAGACTTACATGGGAAGAAGCACAAGACATGTTTCGTCCACCACCTTGTATTAACCCAAGTATTGTAACAATTGATGATAGAGAATTTGAGGAGTATGAGATACCCCCAGTTTTTGGAGATGGGACTACAAACAATTCTCACGCATCTAGGCCTTTGAGCTATGCATCAGAGGAAATGAGTCGAAAGGAATTAGAAATGATTTCGGTAACCAGCAAAGATTCTAAAAAGCGAAGAATGATAGAAAAACCAGACTCAAGCGAAGAACATGAGCCTTTTAGCAGTTTAGCAATTTTGGGTGGTGATGATGATCTTGTTGACCATGCAGACTCATCAGCAGGAGCCTCCAACAAACATCCAAGGCACCGTCAAGGATGCACTTGCATTGTTTGCATTGGAAAAGGGAAACATAAGTTAACATGCACTTGCCTTGCCTGCATGACTGCAAGACAACCATCCAACCCCATTATGATGCGTAAGAAGCAATACCAAACTGAACTTGAAGCAGATGCTATCCCAAAAGATCATATTCATCACAGGGATGAGGGAGATACCAATGGTGCTTCAATAGATGGTCGTCTTAAGGTGATGGATGAACTCAATGCTAGAGACATTGACCTCAACACTCATCCTCATGATGAAGAAGAGCGACATGTTCTTGATGTGGAGTGGGAGACTTTTTTGTTGAGATTAAGGAGGAGGAGAGGGGCTCTTTCTGTGAATTCTGCT 2145 0.379 YLVGTYKLVISHSVFLRFAYANSIFCDKFHHHQTGWRECSFCNKRLHCGCIVSRSLFQYLDFGGIGCVTCVKTYLLSLIQDLETPNQPVRSIKNNPSDHHIEHIDGRLLMDDVGKGKFIQSCKIDKTSESHHWHQDEGNDIDSYIGPNNQGDRRLSNLVKPCRHSLAFPTLKNNRPTWETKTMHNSSSLNISLGTSSGNSIFPFALNVVERRLEGKSSSSPFHQGQIFLPTFPKPSLSEITMNMETSKDMISHERVARPPTDGKGKNFLKSTIVPLFEKVLSASDAGRIGRIVLPKSCAEAYFPPISQPEGLPLQIKDMKGKEWIFQFRFWPNNNSRMYVLEGVTPCMQELQLNAGDIVTFSRIDPEGKFLMGFRRASNSINTQDVSTFAYSNGFLTKETTISTEGKNMDSRNSNPDIFLTRKENYKHCLNRKNCQMVNNNLLRQPISILEKTQNIGPKSKRLLIDKEDAMELRLTWEEAQDMFRPPPCINPSIVTIDDREFEEYEIPPVFGDGTTNNSHASRPLSYASEEMSRKELEMISVTSKDSKKRRMIEKPDSSEEHEPFSSLAILGGDDDLVDHADSSAGASNKHPRHRQGCTCIVCIGKGKHKLTCTCLACMTARQPSNPIMMRKKQYQTELEADAIPKDHIHHRDEGDTNGASIDGRLKVMDELNARDIDLNTHPHDEEERHVLDVEWETFLLRLRRRRGALSVNSA 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01593 715 Gene3D - 261 382 IPR015300 -
Pste8g01593 715 MobiDBLite consensus disorder prediction 544 564 - -
Pste8g01593 715 SUPERFAMILY DNA-binding pseudobarrel domain 274 376 IPR015300 -
Pste8g01593 715 Pfam B3 DNA binding domain 277 377 IPR003340 GO:0003677
Pste8g01593 715 SMART B3_2 277 378 IPR003340 GO:0003677
Pste8g01593 715 ProSiteProfiles B3 DNA-binding domain profile. 277 378 IPR003340 GO:0003677
Pste8g01593 715 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 19 690 - -
Pste8g01593 715 CDD B3_DNA 275 376 IPR003340 GO:0003677
Pste8g01593 715 MobiDBLite consensus disorder prediction 544 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01593 Pste-Chr8 9372901 9385227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01593 19 711 B3 DNA Binding Superfamily AT4G32010 36.649 1.42e-137 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Pste8g01593 B3 3.2e-15 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01593 8 9372901 9385227 Pste8g01593 8 9372901 9385227 ECH
Pste7g01819 7 16770641 16778338 Pste8g01593 8 9372901 9385227 PCT