Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01582 CTATGATTTAGTTACTCTAAACGATAATTGCGAATTTATGATTGATGTAGATATCTTGCTCGTGGCGCTAGCGCCAAGTAGCAAAAAGAGATTGCAGAATTTATTCAGAGCTTGCAACTGCCTATATGAAAATATGAAGGATGGCAGAGGTTACTTTGAATTCAAGTGTCAATATCTTATTCCTTACGACCAAAAAACTATCAATGAATGCATGCTTTCCTTTTCATCATTGTTATTCTTAAGTTCTGATAAGCAAGCCCTTCTTGATTTCTCTGCTTCTGTCCCCAATCGCCGTAACCTTAAATGGAATCCATCTAGCTCAATCTGTACATCTTGGTGTGTTTCTGTCCGGCTCCCTGGAATTGGTCTAGTGGGCACCATCCCTTCCAATACACTTGGAAAGATTGATTCACTCAGAAATATCAGCCTCCGCTCCAACCTACTTAGTGGAAGTCTTCCTCCTGACATTACTTCTCTTCCTTCTCTACAATATCTCTACCTTCAGCATAATAACCTTTCTGGTAACATACCTTCCTTGTTGTCCGCCCACCTCAATGTACTTGATTTGTCATACAATTCCTTCACTGGCGCTATTCCAAAGACATTACAAAACATAACACAACTGACTAGATTGAACCTCCAGAACAACTCCCTATCCGGATTGATACCAAATCTCAATCTCAGGCACTTGAATTTAAGCTATAACCATTTGAATGGATCTATACCTGATGCTCTTCAAATTTTCCCAAATTCTTCCTTTGAGGGTAACTCTCTATGTGGAAAACCTCTAAAATCATGCTCCGTAGTCCCTCTTGCACCTCCCCCCCCATCAACTCCTGCAAGACATAGCTCCAAAAATAAACTTAGTAAGGCAGCTATCATTGCAATTGCAGTTGGCGGTGCTGTGCTATTGCTTTTAGTAGCTCTTGTCATTGTTCTTTGCTGTTTAAAGAAAAAAGAAAATGGAAGCCCCAGAGTAGCTAAAGACAAGGGTCCTAGTGGTGGGAGAAGTGAGAAGCCGAAAGAAGAGTTTGGAAGTGGGGTGCAAGAACCTGAAAAAAACAAATTGGTTTTCTTTGAGGGCAGTTCTTATAATTTTGATCTTGAAGATTTGCTGAGAGCTTCAGCTGAAGTTCTTGGAAAGGGTAGTTATGGTACTGCATATAAGGCTATATTGGAGGAGTCGACTACAGTTGTAGTGAAAAGGTTGAAGGAAGTTGTGGTAGGCAAAAGGGAATTTGAACAGCAGATGGAGATTGTAGGCAGGGTTGGACAACACCCAAATGTCGCGTCACTTCGTGCTTATGCATTTCTGACTACATCCCAAGTGGCAATCTATCTACTCTCTTGCATGGTAACAGGGAAGTGGAAGAACTCCATTAGATTGGAACTCCCGGCCTCAAATGTCCTTCTCAACCAAGATAATGATGGCTGCATTTCGAATTTTGGTCTTACCCCGCATATGAACGTTCCTGCCCCTTCTAGAGCAGCAGGTTACCGTGCTCCTGAAGTGATTGAAATGCGAAAGCACACTCACAAATCGGATGAAAATATGAAGGGTGGCAGAGGATACTTTGAATTCAACTGTCAATATCTTATACCTTACGACCAAAAAACTATCCATGAAGTTTTACTCCCATCCAGT 1645 0.4146 MIDVDILLVALAPSSKKRLQNLFRACNCLYENMKDGRGYFEFKCQYLIPYDQKTINECMLSFSSLLFLSSDKQALLDFSASVPNRRNLKWNPSSSICTSWCVSVRLPGIGLVGTIPSNTLGKIDSLRNISLRSNLLSGSLPPDITSLPSLQYLYLQHNNLSGNIPSLLSAHLNVLDLSYNSFTGAIPKTLQNITQLTRLNLQNNSLSGLIPNLNLRHLNLSYNHLNGSIPDALQIFPNSSFEGNSLCGKPLKSCSVVPLAPPPPSTPARHSSKNKLSKAAIIAIAVGGAVLLLLVALVIVLCCLKKKENGSPRVAKDKGPSGGRSEKPKEEFGSGVQEPEKNKLVFFEGSSYNFDLEDLLRASAEVLGKGSYGTAYKAILEESTTVVVKRLKEVVVGKREFEQQMEIVGRVGQHPNVASLRAYAFLTTSQVAIYLLSCMVTGKWKNSIRLELPASNVLLNQDNDGCISNFGLTPHMNVPAPSRAAGYRAPEVIEMRKHTHKSDENMKGGRGYFEFNCQYLIPYDQKTIHEVLLPSS 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01582 536 SUPERFAMILY Protein kinase-like (PK-like) 365 503 IPR011009 -
Pste8g01582 536 Pfam Leucine Rich Repeat 214 234 IPR001611 GO:0005515
Pste8g01582 536 ProSitePatterns Protein kinases ATP-binding region signature. 367 398 IPR017441 GO:0005524
Pste8g01582 536 PANTHER OS05G0588300 PROTEIN 62 503 - -
Pste8g01582 536 ProSiteProfiles Leucine-rich repeat profile. 149 171 IPR001611 GO:0005515
Pste8g01582 536 Gene3D Phosphorylase Kinase; domain 1 329 430 - -
Pste8g01582 536 Gene3D Transferase(Phosphotransferase) domain 1 431 504 - -
Pste8g01582 536 ProSiteProfiles Protein kinase domain profile. 361 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01582 536 MobiDBLite consensus disorder prediction 310 337 - -
Pste8g01582 536 SUPERFAMILY L domain-like 71 237 - -
Pste8g01582 536 FunFam Leucine-rich repeat receptor-like protein kinase 169 254 - -
Pste8g01582 536 SMART tyrkin_6 361 532 IPR020635 GO:0004713|GO:0006468
Pste8g01582 536 FunFam pollen receptor-like kinase 1 329 435 - -
Pste8g01582 536 Gene3D Ribonuclease Inhibitor 171 255 IPR032675 -
Pste8g01582 536 Gene3D Ribonuclease Inhibitor 69 170 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01582 Pste-Chr8 9216867 9219706 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01582 55 503 Receptor kinase-like Gene Family AT5G58300 55.769 5.91e-170 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pste8g01582 LRR_1 0.068 CL0022