Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01581 TTTTGTTTCCTCTTTGGCTCTTTGCTTTTTATTTATATTTATCTCTAACTTTGACAAAAATAATTAAAGAAAGAGCCCACTTTCCTGAATCTTGAGCCTTTCTTACTTTAATTTTGAATACTCCTTAATGAAACATGTGTCTTCACTTCCTGTAGCTATTATTGTAACCTCTACCCCAAAATGCCCTTCAATTTCAAGCAAATTCTCTGGGTTGTTGAGCTTCTCTGCTCCAATCTAGAGCTGCCCAGATTCAGATTCTTCATGCTTTGTTAATTTACTTGAGATTTTGAAACATGGTACAACGCTATAACTTACTTAGCTTCTCAGTGTGAATACATCTTGGCCTGTGGTTTAAGCTGACTTGTTCCATGAATCCTTGTGATTTCACTTTGCTTCTCTTCAGGAAAATATGAAGGATGGCAGAGGTTACTTTGAATTCAAGTGTCAATATCTTATACCTTACAACCAAAAAACTATCAATGAAGTTTTACTCCCCTCCAATGCATCCTGTCCTTTTCATCATTGTTATTCTTTGTCCTCTGGTTGTTGCTGACTTAAGTTCTGATAAGCAAGCCCTTCTTGATTTTGCTGCTGCTGTCCCCCATCGCCGTAACCTTAAATGGAATCCATCTACCTCAATCTGTACATCTTGGGTAGGCATAACTTGCAATCCAAATGGCACTCGTGTTGTTTCTGTCCGGCTCCTGGAATTGGTCTAGTGGGCACCATCCCTTCCAATACACTTGGAAAGATTGATTCACTCAGAAATATCAGCCTCCGCTCCAACCTACTTAGTGGAAGTCTTCCTCCTGACATTACTTCTCTTCCTTCTCTACAATATCTCTACCTTCAGCATAATAACCTTTCTGGTAACATACCTTCCTTGTTGTCCGCCCACCTCAATGTACTTGATTTGTCATACAATTCCTTCACTGGCGCTATTCCAAAGACATTACAAAACATAACACAACTGACTAGATTGAACCTCCAGAACAACTCCCTATCTGGATTGATACCAAATCTCAATGTCACTAAGCTCAGGCACTTGAATTTAAGCTATAACCATTTGAATGGATCTATACCTGATGCTCTTCAAATTTTCCCAAATTCTTCCTTTGAGGGTAACTCTCTATGTGGAAAACCTCTAAAATCATGCTCCGTAGTCCCTCTTGCACCTCCCCCCCCATCAACTCCTGCAAGACATAGCTCCAAAAATAAACTTAGTAAGGCAGCTATCATTGCAATTGCAGTTGGCGGTGCTGTGCTATTGCTTTTAGTAGCTCTTGTCATTGTTCTTTGCTGTTTAAAGAAAAAAGAAAATGGAAGCCCCAGAGTAGCTAAAGGCAAGGGTCCTAGTGGTGGGAGAAGTGAGAAACCGAAAGAAGAGTTTGGAAGTGGGGTGCAAGAACCTGAAAAAAACAAGTTGCTTTTCTTTGAGGGCAGTTCTTATAATTTTGATCTTGAAGATTTGCTGAGAGCTTCAGCTGAAGTTCTTGGAAAGGGTAGTTATGGTACTGCATATAAGGCTATATTGGAGGAGTCGACTACAGTTGTAGTGAAAAGGTTGAAAGAGGTTGTAGTAGGCAAAAGGGAATTTGAACAGCAGATGGAGATTGTAGGCAGGGTTGGACAACACCCAAATGTCGTGCCACTTCGTGCTTATTATTATTCTAAGGATGAGAAGCTATTGGTTTCTGACTACATCCCAAGTGGCAATTTATCTACTCTCTTGCATGGTAACAGGGCAAGTGGAAGAACTCCATTAGATTGGAACTCCCGGGTAAAAATCTCTATTGGAATTGCTAGAGGAATTGCTCACATACATTCTGTTGGTGGTCCAAAATTCACGCACGGAAATGTCAAAGCCTCAAATGTCCTTCTCAACCAAGATAATGATGGCTGCATTTCGGATTTTGGTCTTACCCCACTTATGAATGTTCCTGCAACCCCTTCTAGAGCAGCAGGTTACCGTGCTCCTGAGGTGATTGAAATGCGAAAGCACACTCACAAATCAGATGTGTACAGTTTTGGTGTCCTCCTTCTGGAAATGCTTACTGGTAAAGCGCCACAACAGTCTCCGGGACGCGATGACATGGTTGATCTCCCTAGGTGGGTCCAGTCTGTTGTTAGGGAAGAGTGGACAGCTGAGGTTTTTGATGTGGAGCTAATGAGATACCAAAACATTGAAGAGGAAATGGTGCAAATGTTGCAAATTGCCATGGCCTGTGTAGCAAAGGTTCCAGATATGAGGCCTAGCATGGAGGAAGTAGTGAGAATGATTGAAGAAATCCGGCTATCTGACTCGGAAAACCGTCCATCTTCAGAAGAGAATAGGTCCAAGGAGGAATCAACTGCCCAAACTCCTTAATTAACTCTGCCCCTTTTTCTTGTGTTCCAAGTAAATTGATTTCTTGAACTTGTTCTTTTCCAGGAAGCAACATTTAGATTCAGTGGTATATAAGAGTGCATGAAACAATTCTCACGGAAGGAATTACTTCTGTTATTTTATTCCCTAGAAAGGTTAACTTTCTTTAATTCTTGTGTATTAACTTTGTGATTCAATTGATGATCTTCATTCAAGAACA 2585 0.4077 MESIYLNLYILGRHNLQSKWHSCCFCPAPGIGLVGTIPSNTLGKIDSLRNISLRSNLLSGSLPPDITSLPSLQYLYLQHNNLSGNIPSLLSAHLNVLDLSYNSFTGAIPKTLQNITQLTRLNLQNNSLSGLIPNLNVTKLRHLNLSYNHLNGSIPDALQIFPNSSFEGNSLCGKPLKSCSVVPLAPPPPSTPARHSSKNKLSKAAIIAIAVGGAVLLLLVALVIVLCCLKKKENGSPRVAKGKGPSGGRSEKPKEEFGSGVQEPEKNKLLFFEGSSYNFDLEDLLRASAEVLGKGSYGTAYKAILEESTTVVVKRLKEVVVGKREFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVSDYIPSGNLSTLLHGNRASGRTPLDWNSRVKISIGIARGIAHIHSVGGPKFTHGNVKASNVLLNQDNDGCISDFGLTPLMNVPATPSRAAGYRAPEVIEMRKHTHKSDVYSFGVLLLEMLTGKAPQQSPGRDDMVDLPRWVQSVVREEWTAEVFDVELMRYQNIEEEMVQMLQIAMACVAKVPDMRPSMEEVVRMIEEIRLSDSENRPSSEENRSKEESTAQTP 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01581 582 MobiDBLite consensus disorder prediction 557 582 - -
Pste8g01581 582 MobiDBLite consensus disorder prediction 245 261 - -
Pste8g01581 582 Pfam Protein kinase domain 289 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01581 582 PANTHER OS05G0588300 PROTEIN 29 569 - -
Pste8g01581 582 FunFam Leucine-rich repeat receptor-like protein kinase 91 179 - -
Pste8g01581 582 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 362 569 - -
Pste8g01581 582 ProSiteProfiles Leucine-rich repeat profile. 71 93 IPR001611 GO:0005515
Pste8g01581 582 CDD STKc_IRAK 292 557 - -
Pste8g01581 582 SUPERFAMILY L domain-like 36 174 - -
Pste8g01581 582 Gene3D Phosphorylase Kinase; domain 1 254 361 - -
Pste8g01581 582 FunFam pollen receptor-like kinase 1 254 361 - -
Pste8g01581 582 ProSitePatterns Protein kinases ATP-binding region signature. 292 323 IPR017441 GO:0005524
Pste8g01581 582 ProSiteProfiles Protein kinase domain profile. 286 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01581 582 MobiDBLite consensus disorder prediction 235 261 - -
Pste8g01581 582 MobiDBLite consensus disorder prediction 557 576 - -
Pste8g01581 582 Pfam Leucine Rich Repeat 139 159 IPR001611 GO:0005515
Pste8g01581 582 Gene3D Transferase(Phosphotransferase) domain 1 362 580 - -
Pste8g01581 582 Gene3D Ribonuclease Inhibitor 18 182 IPR032675 -
Pste8g01581 582 SUPERFAMILY Protein kinase-like (PK-like) 290 565 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01581 Pste-Chr8 9204519 9209062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01581 29 580 Receptor kinase-like Gene Family AT5G58300 70.337 0.0 787
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pste8g01581 Pkinase 1e-37 CL0016