Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01555 AATCTCCAGTACACTAGACTATCTGACGTGTTCCATGGTCAAAAGATTGGATGGGTTCGAGAACAGCACCACCGATTCTAGTCTCCTCAAGGGTCTTAACTTGAGTGCCCTAATGACCATGACAACTGCGAGCAACAAGAAGCTTTTGTTGGCAGATGGAATCCCTTCTGGGAGGCTTCTCCAGGCTGCAAACCCCAAACCCAATGTTTTTGTGGCCCAGGATGGAAGCGGACAGGTGAAGACCATCCACGAGGCTCTTATGATGGTGCCTAAGAAGAACAAGCAACCCATTTGTCATTTACATCAAGGAGGGTGTGAGTATGTTAACTTGAACAAGCACCTGACCTATGTCACCATGATCGGAGATGGCCTCGCCAAGACTAGAATCACCGACAACAAGAACTACGTGGATGACATCCAAACCTACAACACAGCCACCGTGGGTGTGAACACTGCGGACTTCATGGCAAAGAATATCAGGTTCGAGAACTTAGCAGGAGCAAAGAAGCTC 511 0.4834 MVKRLDGFENSTTDSSLLKGLNLSALMTMTTASNKKLLLADGIPSGRLLQAANPKPNVFVAQDGSGQVKTIHEALMMVPKKNKQPICHLHQGGCEYVNLNKHLTYVTMIGDGLAKTRITDNKNYVDDIQTYNTATVGVNTADFMAKNIRFENLAGAKKL 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01555 159 PANTHER PECTINESTERASE 29 158 - -
Pste8g01555 159 Pfam Pectinesterase 57 158 IPR000070 GO:0030599|GO:0042545
Pste8g01555 159 SUPERFAMILY Pectin lyase-like 53 156 IPR011050 -
Pste8g01555 159 Gene3D - 55 158 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01555 Pste-Chr8 8846373 8846986 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01555 34 158 Carbohydrate Esterase AT3G05610 53.285 6.75e-31 115