Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01541 AAAAGAGGAAATATGTCAAAGGGTGACAAGGTTGAGGTTTTGGACTTTTGGGCTAGCCCATTTTGTGCAAGAGTGAAAATTGCTTTGGAAGAGAAGGGGGTGAAACATGTAGACAGAGAAGAGCACGATTTGTTTGGGGGCAAGAGTGAACTCCTCCTGAAGTCAAATCCTATTCATCAAAAAGTTCCTGTGCTCTTGCACAATGACAGACCTCTCGCTGAGTCTGCTATCATAGTTAGCTATATTGATGAAGCTTGGCCTTCCAACCCACTGCTTCCAGCTATTGTTTATGATCGTGCACAAGCCAGATTCTGGGCTGATTACATTGACAAAAAGGTATTTGAAGCTGGGAGGAATATCTGGGCAAGCAATGGAGAAGAGCGAGAAGTGGCCACTAGGGACTTCATTGAAGTTTTAAAGCATCTTGAGGAAGCTTTAGGGGACAAGGACTATTTTGGTGGTGATGCCTTTGGATATGTGGACATTATAGCCATTCCTCATTCAGCCTGGTTTTTGGCTTATGAGAAGCTTGGAGCCTTCAAAGTTGAAGACCATGCACCAAAAATCTCAGCTTGGATTAAGAAATGTTTGCAAAGGGAATCTGTTGCCAAAGTTCTGCCTGACCCAGAGAAAGTCTACCAGTTTGTCCTTTATTTCAGGAAGATGTCAGGACTTGATTAATGAATGAAATCAAGCATGCTTGATATGCTCATAACTCATGACCGGG 727 0.4305 MSKGDKVEVLDFWASPFCARVKIALEEKGVKHVDREEHDLFGGKSELLLKSNPIHQKVPVLLHNDRPLAESAIIVSYIDEAWPSNPLLPAIVYDRAQARFWADYIDKKVFEAGRNIWASNGEEREVATRDFIEVLKHLEEALGDKDYFGGDAFGYVDIIAIPHSAWFLAYEKLGAFKVEDHAPKISAWIKKCLQRESVAKVLPDPEKVYQFVLYFRKMSGLD 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01541 222 FunFam Glutathione S-transferase U20 91 222 - -
Pste8g01541 222 Pfam Glutathione S-transferase, N-terminal domain 12 84 IPR004045 -
Pste8g01541 222 Pfam Glutathione S-transferase, C-terminal domain 123 196 IPR004046 -
Pste8g01541 222 Gene3D - 91 222 - -
Pste8g01541 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 86 IPR004045 -
Pste8g01541 222 SUPERFAMILY GST C-terminal domain-like 80 218 IPR036282 -
Pste8g01541 222 Gene3D Glutaredoxin 1 90 - -
Pste8g01541 222 SFLD Main.3: Omega- and Tau-like 4 218 IPR045073 -
Pste8g01541 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 211 IPR010987 -
Pste8g01541 222 CDD GST_C_Tau 93 215 IPR045074 GO:0004364|GO:0006749
Pste8g01541 222 FunFam Glutathione S-transferase GSTU6 2 90 - -
Pste8g01541 222 CDD GST_N_Tau 7 82 - -
Pste8g01541 222 SFLD Main (cytGST) 4 218 - -
Pste8g01541 222 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 9 210 IPR045073 -
Pste8g01541 222 SUPERFAMILY Thioredoxin-like 7 109 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01541 Pste-Chr8 8688871 8690170 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01541 4 217 Glutathione S-transferase Gene Family AT1G78380 58.605 4.42e-85 249