Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01529 ATGTCGCTTCCCTGCTTCGCCCTTGTCTCCACAATACTTTCTATTCTTTCTTTCTTCTATCTCGTTACAGCCGCCACCGAGTTCGACTTCGGAACGTTAACGTTAGGAAGCCTGAAACTTCTCGGTGATGCTCACTTGAATAACGGAACCCTCACCCTCACGCGCGAGCTCGCCGTTCCCACCTCTAGCGCCGGCAGAGCCCTTTACTCCCGTCCGGTGAGGTTCCGCCAACCTGGAACCCCTTCTCCCGCCAGCTTCACCACCTTTTTTTCATTCTCAGTTACCAACCTCAACCCTTCCTCCGTCGGCGCCGGCCTCTCTTTTCTCCTCTCTCCCGATGACGACACCATCGGCGATGCCGGCGGCTTTCTCGGCCTTCTCGGCCCCCTCTCCTCCGCCGCTGCCTTCATCGCTGTCGAGTTTGATACACTCATGGACGTCGAGTTCAAGGACATTAATGGAAACCACGTTGGTGTCGACTTAAACAGCGTCGTTTCCACTGAGGTTGCTGATTTGGCCAACATTGGGATTGATCTCAAGAGTGGTGACCTAATCAATGCGTGGATCGAGTTTGATGGATCCAGCAAAGGGTTTAGTGTGTGGGTTTCCTATTCCAATCTCAAACCGAAAGATCCCGTTTTGTCGATGAATCTCGATGTGGATAAGTATTTGAATGATTTTATGTATGTCGGGTTCTCTGCTTCAACCCAAGGTAGCACCGAGATCCATAAAATAGAGTGGTGGAGTTTTGGCTCGTCTTTTGCGGTGGCCGAGGCGGAGGCCGCACCGCCTCCTCCTCCGGCTGTCAGTTTGATGAACCCGACGGCCAATTCGGTGAAGTCCGCGCCTCCTTCTCTGGCTCCTTCTCATAGTGAAGAGAAAGAGAGCAAAAGCAAATCTTCTTGCCATAATGGCTTGTGTAAGCAAAATTTGGGAGCGGTGGCTGGTGTTGTTACTGCTGGGGCATTTGTTTTGGCACTTTTTGCTGGTGCATTGATTTGGTTTTACTCTAAGAAGGTTAAACGCGTCAACAAGTTTGATTCACTTGGTTCTGAGATCATTAAAATGCCGAAGCAGTTTACCTATAAGGAGCTGAGAACTGCTACCAAGTGTTTCAATGCGAATAGGATCATTGGTCATGGTGCCTTTGGGACAGTGTATAAAGGGGTTTTGCCTGAGAATGGGGACATTGTTGCTGTGAAGAGGTGCAGTCATAGTAGCCAGGGGAAGAACGAGTTTTTGTCTGAGTTATCCATCATTGGGAGCCTGAGGCATCGAAATCTTGTTCGGCTTCAGGGGTGGTGCCATGAGAAAGGGGAGATTTTGCTGGTGTATGACTTGATGCCTAATGGTAGTTTGGATAAGGCTTTGTTTGAGGCTAGGACGCCGCTTCCCTGGCCTCACCGTCGCAAGATTTTGTTGGGTGTGGCTTCTGCATTGGCCTACTTGCACCAAGAGTGTGAGAATCAGGTGATTCATAGGGACATTAAGACTAGTAATATAATGTTGGATGAAGGGTTCAATGCCCGGTTGGGAGATTTTGGTTTGGCAAGGCAAACTGAGCATGATAAGTCGCCGGATGCCACAGTGGCTGCTGGGACGATGGGGTACCTGGCACCTGAGTATCTCCTGACCGGGAAGGCAACGGAGAAAACTGATGTGTTCAGTTATGGTGCAGTGGTTCTTGAGGTGGCTAGTGGGAGAAGACCGATAGAGAAGGATGCCAATGGCGGTGGTAAAGCTGGGATTAGCTGCAATTTGGTAGAATGGGTTTGGAGTTTGCATCGGGAAGGTAGGTTGCACATGGCAGCTGATCCGAGGCTTGAGGGTGAGTTTGATGAGGGGGAGATGAGGAGGGTGCTCTTGGTTGGGCTAGCTTGCTCTCACCCCGATCCATTGACTAGACCTACTATGAGGGGTGTGGTTCAGATGCTGGTGGGTGAGGCTGAAGTGCCTATTGTCCCAAGAACCAAGCCAACAACCGGTTTTAGTACTTCCCATTCCCACTTATTACTGAGTTTGCAAGATAGTGTATCTGACTGTGATGGTATAATCACCATCTCTACCTCCACATCAGAGAACAGCTTCAATCTTGGGGATATAGTCTGA 2109 0.5002 MSLPCFALVSTILSILSFFYLVTAATEFDFGTLTLGSLKLLGDAHLNNGTLTLTRELAVPTSSAGRALYSRPVRFRQPGTPSPASFTTFFSFSVTNLNPSSVGAGLSFLLSPDDDTIGDAGGFLGLLGPLSSAAAFIAVEFDTLMDVEFKDINGNHVGVDLNSVVSTEVADLANIGIDLKSGDLINAWIEFDGSSKGFSVWVSYSNLKPKDPVLSMNLDVDKYLNDFMYVGFSASTQGSTEIHKIEWWSFGSSFAVAEAEAAPPPPPAVSLMNPTANSVKSAPPSLAPSHSEEKESKSKSSCHNGLCKQNLGAVAGVVTAGAFVLALFAGALIWFYSKKVKRVNKFDSLGSEIIKMPKQFTYKELRTATKCFNANRIIGHGAFGTVYKGVLPENGDIVAVKRCSHSSQGKNEFLSELSIIGSLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARTPLPWPHRRKILLGVASALAYLHQECENQVIHRDIKTSNIMLDEGFNARLGDFGLARQTEHDKSPDATVAAGTMGYLAPEYLLTGKATEKTDVFSYGAVVLEVASGRRPIEKDANGGGKAGISCNLVEWVWSLHREGRLHMAADPRLEGEFDEGEMRRVLLVGLACSHPDPLTRPTMRGVVQMLVGEAEVPIVPRTKPTTGFSTSHSHLLLSLQDSVSDCDGIITISTSTSENSFNLGDIV 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01529 702 Gene3D - 24 263 - -
Pste8g01529 702 CDD STKc_IRAK 378 645 - -
Pste8g01529 702 ProSitePatterns Serine/Threonine protein kinases active-site signature. 491 503 IPR008271 GO:0004672|GO:0006468
Pste8g01529 702 Pfam Protein kinase domain 373 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01529 702 Gene3D Transferase(Phosphotransferase) domain 1 448 651 - -
Pste8g01529 702 SUPERFAMILY Protein kinase-like (PK-like) 354 668 IPR011009 -
Pste8g01529 702 ProSiteProfiles Protein kinase domain profile. 372 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01529 702 FunFam L-type lectin-domain containing receptor kinase VIII.1 24 263 - -
Pste8g01529 702 MobiDBLite consensus disorder prediction 265 299 - -
Pste8g01529 702 FunFam L-type lectin-domain containing receptor kinase VIII.1 448 663 - -
Pste8g01529 702 SMART serkin_6 372 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01529 702 Gene3D Phosphorylase Kinase; domain 1 335 447 - -
Pste8g01529 702 Pfam Legume lectin domain 27 260 IPR001220 GO:0030246
Pste8g01529 702 ProSitePatterns Protein kinases ATP-binding region signature. 378 401 IPR017441 GO:0005524
Pste8g01529 702 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 262 IPR013320 -
Pste8g01529 702 PANTHER - 48 655 - -
Pste8g01529 702 FunFam L-type lectin-domain containing receptor kinase VIII.1 336 447 - -
Pste8g01529 702 CDD lectin_legume_LecRK_Arcelin_ConA 26 254 IPR001220 GO:0030246
Pste8g01529 702 ProSitePatterns Legume lectins beta-chain signature. 137 143 IPR019825 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01529 Pste-Chr8 8563392 8565500 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01529 8 684 Receptor kinase-like Gene Family AT3G53380 69.287 0.0 944
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pste8g01529 Pkinase 1.6e-50 CL0016